Return to main results Retrieve Phyre Job Id

Job DescriptionP08868
Confidence1.83%DateThu Jan 5 11:01:41 GMT 2012
Rank66Aligned Residues25
% Identity20%Templated1zs8a2
SCOP infoMHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10. ........20........
Predicted Secondary structure 
.





Query SS confidence 







.
















Query Sequence  YACCGLLL. CPAYPQHFAHGYVDKIP
Query Conservation 







.
















Alig confidence 







.
















Template Conservation 
  
 

    
 
 
  

 


  
Template Sequence  TFRIVIMEPGILEPRFIQVSYVDSIQ
Template Known Secondary structure 
SS
SS
TT
Template Predicted Secondary structure 









Template SS confidence 

























   6...10.........20.........30.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions