Job Description P08868 Confidence 1.31% Date Thu Jan 5 11:01:41 GMT 2012 Rank 95 Aligned Residues 25 % Identity 32% Template c3rbbA_ PDB info PDB header:viral protein, protein binding Chain: A: PDB Molecule:protein nef; PDBTitle: hiv-1 nef protein in complex with engineered hck sh3 domain Resolution 2.35 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	P	M	Q	V	C	R	C	R	R	P	P	H	P	V	T	F	R	R	F	S	S	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	P	M	S	L	H	G	M	E	D	A	E	K	E	V	L	V	W	R	F	D	S	K	L
Template Known Secondary structure				G	G	G	S	T	T					S	S									G	G	G
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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