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Job DescriptionP08868
Confidence1.29%DateThu Jan 5 11:01:41 GMT 2012
Rank98Aligned Residues16
% Identity31%Templatec2mhaC_
PDB info PDB header:histocompatibility antigenChain: C: PDB Molecule:class i histocompatibility antigen (h-2kb) PDBTitle: crystal structure of the major histocompatibility complex2 class i h-2kb molecule containing a single viral peptide:3 implications for peptide binding and t-cell receptor4 recognition
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20........
Predicted Secondary structure 




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Query Sequence  PAYPQHFAHGYVDKIP
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Template Sequence  LGEPRYMEVGYVDDTE
Template Known Secondary structure  SSS

TT
Template Predicted Secondary structure 





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   17..20.........30..
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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