Return to main results Retrieve Phyre Job Id

Job DescriptionP0A805
Confidence46.91%DateThu Jan 5 11:06:33 GMT 2012
Rank20Aligned Residues32
% Identity22%Templated1iwga6
SCOP infoMultidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Resolution3.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.... .....50.........60..
Predicted Secondary structure 




.






Query SS confidence 













.

















Query Sequence  RASPSLLDGIVVEY. YGTPTPLRQLASVTVEDS
Query Conservation 



  

 
 
  . 
   

  

 

    
Alig confidence 













.

















Template Conservation        
  
 
    
  


  

 
    
Template Sequence  RMLPDDIGDWYVRAADGQMVPFSAFSSSRWEYG
Template Known Secondary structure  SSSGGGGTT


TTS

GGGT



Template Predicted Secondary structure 








Template SS confidence 
































   780.........790.........800.........810..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions