Return to main results Retrieve Phyre Job Id

Job DescriptionP0A805
Confidence47.94%DateThu Jan 5 11:06:33 GMT 2012
Rank18Aligned Residues26
% Identity23%Templated1iwga5
SCOP infoMultidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Resolution3.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40..... ....50........
Predicted Secondary structure 



..


Query SS confidence 












. .












Query Sequence  SPSLLDGIVVEYY. . GTPTPLRQLASVT
Query Conservation 

  

 
 
   ..
   

  

 

Alig confidence 












..












Template Conservation     

  
 
     
  
 
 


 
 
Template Sequence  STEEFGKILLKVNQDGSRVLLRDVAKIE
Template Known Secondary structure  ST
TTT
Template Predicted Secondary structure 







Template SS confidence 



























   242.......250.........260.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions