|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | S | D | I | R | K | D | A | E | V | R | M | D | K | C | V | E | A | F | K | T | Q | I | S | K | I | R | T | G | R | A | S | P | S | L | L | D | G | I | V | V | E | Y | Y | G | T | P | T | P | L | R | Q | L | A | S | V | T | V | E | D | S | R | T | L | K | I | N | V | F | D | R | S | M | S | P | A | V | E | K | A |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|
|   |
|   |
|   |   |
|   |   |   |
|   |   |
|
|
|
|
|
|
|
|   |   |
|
|   |
|   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |
|   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|
|   |
|
|
|   |
|   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|   |
|   |   |
|   |
|
|
Template Sequence |   |
V | N | P | F | I | K | E | A | K | E | K | M | K | R | T | L | E | K | I | E | D | E | L | R | K | M | R | T | G | K | P | S | P | A | I | L | E | E | I | K | V | D | Y | Y | G | V | P | T | P | V | N | Q | L | A | T | I | S | I | S | E | E | R | T | L | V | I | K | P | W | D | K | S | V | L | S | L | I | E | K | A |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| S | S |
|
| G | G | G | G | T | T |
|  |  |  |  | T | T |  |  |  |  | G | G | G | S |  |  |  |  |  |
| S | T | T |  |  |  |  |  |  | S | S | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | M | A | S | D | L | G | L | N | P | N | S | A | G | S | D | I | R | V | P | L | P | P | L | T | E | E | R | R | K | D | L | T | K | I | V | R | G | E | A | E | Q | A | R | V | A | V | R | N | V | R | R | D | A | N | D | K | V | K | A | L | L | K | D | K | E | I | S | E | D | D | D | R | R | S | Q | D | D | V | Q |
Query Conservation |   |
|   |   |
|   |
|   |
|
|
|   |   |
|
|   |   |
|
|
|   |
|
|   |
|
|   |
|   |
|   |   |
|
|
|   |   |
|   |   |   |
|   |
|
|   |   |
|
|
|
|
|   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|
|
|
|   |   |
|   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|   |
|
|
|   |   |
|
|   |   |
|
|
|   |
|
|   |
|
|   |
|   |
|   |
|
|
|
|   |   |
|   |   |   |
|   |   |
|   |   |
|
|   |
|
|   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |
|
|
|
|   |   |
|   |   |
|   |   |
|
|
Template Sequence |   |
I | N | A | S | D | L | G | L | N | P | I | N | D | G | N | V | I | R | L | V | F | P | S | P | T | T | E | Q | R | E | K | W | V | K | K | A | K | E | I | V | E | E | G | K | I | A | I | R | N | I | R | R | E | I | L | K | K | I | K | E | D | Q | K | E | G | L | I | P | E | D | D | A | K | R | L | E | N | E | I | Q |
Template Known Secondary structure |   |
 |  |  | S | S | S |
|
|
|
|  |  |
| S | S |
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
  |
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | L | T | D | A | A | I | K | K | I | E | A | A | L | A | D | K | E | A | E | L | M | Q | F |
Query Conservation |   |
  |
|
|
|   |   |
|   |   |
|
|   |   |   |   |   |
|
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |
|   |   |
|
|   |
|   |   |   |
|
|
|
|
|
|   |   |
Template Sequence |   |
K | L | T | D | E | F | I | E | K | L | D | E | V | F | E | I | K | K | E | E | I | M | E | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . |
  |