Job Description P0A805 Confidence 20.58% Date Thu Jan 5 11:06:33 GMT 2012 Rank 41 Aligned Residues 76 % Identity 11% Template c3b50A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sialic acid-binding periplasmic protein siap; PDBTitle: structure of h. influenzae sialic acid binding protein2 bound to neu5ac. Resolution 1.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	E	E	R	R	K	D	L	T	K	I	V	R	G	E	A	E	Q	A	R	V	A	V	R	N	V	R	R	D	A	N	D	K	V	K	A	L	L	K	D	K	E	I	S	E	D	D	D	R	R	S	Q	D	D	V	Q	K	L	T	D	A	A	I	K	K	I	E	A	A	L	A	D	K	E	A	E	L
Query Conservation
Alig confidence																																										.	.
Template Conservation																																										.	.
Template Sequence		L	P	E	D	L	Q	K	V	V	K	D	A	A	E	N	A	A	K	Y	H	T	K	L	F	V	D	G	E	K	D	L	V	T	F	F	E	K	Q	G	V	.	.	K	I	T	H	P	D	L	V	P	F	K	E	S	M	K	P	Y	Y	A	E	F	V	K	Q	T	G	Q	K	G	E	S	A	L	K	Q	I
Template Known Secondary structure		S																																					T	T		.	.							S							T
Template Predicted Secondary structure																																										.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions