Job Description P0A805 Confidence 10.74% Date Thu Jan 5 11:06:33 GMT 2012 Rank 71 Aligned Residues 67 % Identity 16% Template c2p4vA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor greb; PDBTitle: crystal structure of the transcript cleavage factor, greb2 at 2.6a resolution Resolution 2.60 Å

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		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		P	P	L	T	E	E	R	R	K	D	L	T	K	I	V	R	G	E	A	E	Q	A	R	V	A	V	R	N	.	V	R	R	D	A	N	D	K	V	K	A	L	L	K	D	K	E	I	S	E	D	D	D	R	R	S	Q	D	D	V	Q	K	L	T	D	A	A	I	K	K	I	E	A	A	L	A	D
Query Conservation																														.
Alig confidence																		.	.	.	.	.	.	.	.					.
Template Conservation																		.	.	.	.	.	.	.	.
Template Sequence		P	L	V	T	R	E	G	Y	E	K	L	K	Q	E	L	N	.	.	.	.	.	.	.	.	Y	L	W	R	E	E	R	P	E	V	T	K	K	V	T	W	A	A	S	L	G	D	R	S	E	N	A	D	Y	Q	Y	N	K	K	R	L	R	E	I	D	R	R	V	R	Y	L	T	K	C	M	E	N
Template Known Secondary structure																		.	.	.	.	.	.	.	.					T																S		T	T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.									20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions