Job Description P0ABH7 Confidence 100.00% Date Thu Jan 5 11:15:31 GMT 2012 Rank 7 Aligned Residues 394 % Identity 25% Template d2ctsa_ SCOP info Citrate synthase Citrate synthase Citrate synthase Resolution 2.00

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		2	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																																																																							.	.
Query SS confidence									.																																																																							.	.
Query Sequence		A	D	T	K	A	K	L	.	T	L	N	G	D	T	A	V	E	L	D	V	L	K	G	T	L	G	Q	D	V	I	D	I	R	T	L	G	S	K	G	V	F	T	F	D	P	G	F	T	S	T	A	S	C	E	S	K	I	T	F	I	D	G	D	E	G	I	L	L	H	R	G	F	P	I	D	Q	L	A	.	.
Query Conservation									.																																																																							.	.
Alig confidence									.																													.	.	.	.	.																									.													.	.
Template Conservation																																						.	.	.	.	.																									.
Template Sequence		T	N	L	K	D	I	L	A	D	L	I	P	K	E	Q	A	R	I	K	T	F	R	Q	Q	H	G	N	T	A	V	G	Q	I	T	V	D	.	.	.	.	.	M	M	Y	G	G	M	R	G	M	K	G	L	V	Y	E	T	S	V	L	D	P	D	E	G	.	I	R	F	R	G	Y	S	I	P	E	C	Q	K	M
Template Known Secondary structure																											T	T										.	.	.	.	.				T	T	S	T	T								S					T	T	T		.			S	S	S		B
Template Predicted Secondary structure																																						.	.	.	.	.																									.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.
									79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																																																								.	.
Query SS confidence		.	.	.	.	.	.	.																																																																								.	.
Query Sequence		.	.	.	.	.	.	.	T	D	S	N	Y	L	E	V	C	Y	I	L	L	N	G	E	K	P	T	Q	E	Q	Y	D	E	F	K	T	T	V	T	R	H	T	M	I	H	E	Q	I	T	R	L	F	H	A	F	R	R	D	S	H	P	M	A	V	M	C	G	I	T	G	A	L	A	A	F	Y	H	D	S	.	.
Query Conservation		.	.	.	.	.	.	.																																																																								.	.
Alig confidence		.	.	.	.	.	.	.																																																																								.	.
Template Conservation
Template Sequence		L	P	K	A	K	G	G	E	E	P	L	P	E	G	L	F	W	L	L	V	T	G	Q	I	P	T	E	E	Q	V	S	W	L	S	K	E	W	A	K	R	A	A	L	P	S	H	V	V	T	M	L	D	N	F	P	T	N	L	H	P	M	S	Q	L	S	A	A	I	T	A	L	N	S	E	S	N	F	A	R	A
Template Known Secondary structure		S		B		S	S		S	S	B												S	S																	T																S	S	S													G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
							150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure		.	.	.	.	.																														.	.
Query SS confidence		.	.	.	.	.																														.	.
Query Sequence		.	.	.	.	.	L	D	V	N	N	P	R	H	R	E	I	A	A	F	R	L	L	S	K	M	P	T	M	A	A	M	C	Y	K	.	.	Y	S	I	G	Q	P	F	V	Y	P	R	N	D	L	S	Y	A	G	N	F	L	N	M	M	F	S	T	P	C	E	P	Y	E	V	N	P	I	L	E	R	A	M	D	R
Query Conservation		.	.	.	.	.																														.	.
Alig confidence		.	.	.	.	.																														.	.																											.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.
Template Sequence		Y	A	E	G	I	H	R	T	K	Y	W	E	L	I	Y	E	D	C	M	D	L	I	A	K	L	P	C	V	A	A	K	I	Y	R	N	L	Y	R	E	G	S	S	I	G	A	I	D	S	K	L	D	W	S	H	N	F	T	N	M	L	G	Y	.	.	.	.	.	.	.	T	D	A	Q	F	T	E	L	M	R	L
Template Known Secondary structure				T	T			G	G	G																													S	T	T								T	T	S											T		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.								220	.	.	.	.	.	.	.	.	.	230
		223	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.								280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure											.																																																	.	.	.	.	.	.	.
Query SS confidence											.																																																	.	.	.	.	.	.	.
Query Sequence		I	L	I	L	H	A	D	H	E	.	Q	N	A	S	T	S	T	V	R	T	A	G	S	S	G	A	N	P	F	A	C	I	A	A	G	I	A	S	L	W	G	P	A	H	G	G	A	N	E	A	A	L	K	M	L	E	E	I	.	.	.	.	.	.	.	S	S	V	K	H	I	P	E	F	V	R	R	A	K	D
Query Conservation											.																																																	.	.	.	.	.	.	.
Alig confidence											.																																																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	L	T	I	H	S	D	H	E	G	G	N	V	S	A	H	T	S	H	L	V	G	S	A	L	S	D	P	Y	L	S	F	A	A	A	M	N	G	L	A	G	P	L	H	G	L	A	N	Q	E	V	L	V	W	L	T	Q	L	Q	K	E	V	G	K	D	V	S	D	E	K	L	R	D	Y	I	W	N	T	L	N
Template Known Secondary structure						T	S			T	T	T	S											T	T	T															T	S	T	T	T	T	T																T		S	S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350			.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		K	N	D	S	F	R	L	M	G	F	G	H	R	V	Y	K	N	Y	D	P	R	A	T	V	M	R	E	T	C	H	E	V	L	K	E	L	G	T	K	D	D	L	L	E	V	A	M	E	L	E	N	I	A	L	N	D	.	.	P	Y	F	I	E	K	K	L	Y	P	N	V	D	F	Y	S	G	I	I	L	K	A
Query Conservation																																																										.	.
Alig confidence					.	.																														.	.	.	.																			.	.
Template Conservation					.	.																														.	.	.	.
Template Sequence		S	G	R	.	.	V	V	P	G	Y	G	H	A	V	L	R	K	T	D	P	R	Y	T	C	Q	R	E	F	A	L	K	H	L	P	.	.	.	.	H	D	P	M	F	K	L	V	A	Q	L	Y	K	I	V	P	N	V	L	L	E	Q	G	K	A	K	N	P	W	P	N	V	D	A	H	S	G	V	L	L	Q	Y
Template Known Secondary structure		T	T		.	.			T	T	B			S	S			S																	T	.	.	.	.	T																					T	T			S			S	B		T
Template Predicted Secondary structure					.	.																														.	.	.	.
Template SS confidence
		311	.	.			.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.					.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		373	.	.	.		.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		M	G	I	P	.	S	S	M	F	T	V	I	F	A	M	A	R	T	V	G	W	I	A	H	W	S	E	M	H	S	D	G	M	K	I	A	R	P	R	Q	L	Y	T
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		Y	G	M	T	E	M	N	Y	Y	T	V	L	F	G	V	S	R	A	L	G	V	L	A	Q	L	I	W	S	R	A	L	G	F	P	L	E	R	P	K	S	M	S	T
Template Known Secondary structure		T	T				G	G	G																							T	T
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.