Job Description P0ABH7 Confidence 10.13% Date Thu Jan 5 11:15:31 GMT 2012 Rank 49 Aligned Residues 54 % Identity 20% Template c3cw1D_ PDB info PDB header:splicing Chain: D: PDB Molecule:small nuclear ribonucleoprotein sm d3; PDBTitle: crystal structure of human spliceosomal u1 snrnp Resolution 5.49 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																						.	.	.	.			.																										.	.	.
Query SS confidence																						.	.	.	.			.																										.	.	.
Query Sequence		L	D	V	L	K	G	T	L	G	Q	D	V	I	D	I	R	T	L	G	S	.	.	.	.	K	G	.	V	F	T	F	D	P	G	F	T	S	T	A	S	C	E	S	K	I	T	F	I	D	G	D	E	.	.	.	G	I	L	L	H	R	G	F	P	I
Query Conservation																						.	.	.	.			.																										.	.	.
Alig confidence															.	.						.	.	.	.			.						.																				.	.	.
Template Conservation															.	.																		.
Template Sequence		I	K	V	L	H	E	A	E	G	H	I	V	T	.	.	C	E	T	N	T	G	E	V	Y	R	G	K	L	I	E	A	E	.	D	N	M	N	C	Q	M	S	N	I	T	V	T	Y	R	D	G	R	V	A	Q	L	E	Q	V	Y	I	R	G	C	K	I
Template Known Secondary structure		T	T	T	T	T	S	S	S	S	S				.	.				T	T													.	T	T	S						S						S	S	S						S						G	G	G
Template Predicted Secondary structure															.	.																		.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions