Job Description P0ABH7 Confidence 100.00% Date Thu Jan 5 11:15:31 GMT 2012 Rank 5 Aligned Residues 390 % Identity 38% Template c2ibpB_ PDB info PDB header:transferase Chain: B: PDB Molecule:citrate synthase; PDBTitle: crystal structure of citrate synthase from pyrobaculum aerophilum Resolution 1.60 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	D	I	R	T	L	G	S	K	G	V	F	T	F	D	P	G	F	T	S	T	A	S	C	E	S	K	I	T	F	I	D	G	D	E	G	I	L	L	H	R	G	F	P	I	D	Q	L	A	T	D	S	N	Y	L	E	V	C	Y	I	L	L	N	G	E	K	P	T	Q	E	Q	Y	D	E	F	K	T	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	T	T	G	K	I	L	Q	S	P	C	G	P	I	I	H	G	L	E	D	V	L	I	K	S	T	S	I	S	D	I	D	G	E	K	G	I	L	W	Y	R	G	Y	R	I	E	E	L	A	R	L	S	T	Y	E	E	V	S	Y	L	I	L	Y	G	R	L	P	T	K	R	E	L	E	D	Y	I	N	R	M
Template Known Secondary structure					S	S						T	T					G	G	G	T	T							S	S					T	T	T	T					T	T																						S	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.												.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	R	H	T	M	I	H	E	Q	I	T	R	L	F	H	A	F	R	R	D	S	H	P	M	A	V	M	C	G	I	T	G	A	L	A	A	F	Y	H	D	S	L	D	V	.	.	.	.	.	.	.	.	.	.	.	N	N	P	R	H	R	E	I	A	A	F	R	L	L	S	K	M	P	T	M	A	A	M	C	Y
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.
Template Sequence		K	K	Y	R	E	L	H	P	A	T	V	E	V	I	R	N	L	A	K	.	A	H	P	M	F	A	L	E	A	A	V	A	A	E	G	A	Y	D	E	D	N	Q	K	L	I	E	A	L	S	V	G	R	Y	K	A	E	E	K	E	L	A	Y	R	I	A	E	K	L	V	A	K	M	P	T	I	V	A	Y	H	Y
Template Known Secondary structure					T	S												T	T	T	.	S																													T	T			S
Template Predicted Secondary structure																					.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	S	I	G	Q	P	F	V	Y	P	R	N	D	L	S	Y	A	G	N	F	L	N	M	M	F	S	T	P	C	E	P	Y	E	V	N	P	I	L	E	R	A	M	D	R	I	L	I	L	H	A	D	H	E	Q	N	A	S	T	S	T	V	R	T	A	G	S	S	G	A	N	P	F	A	C	I	A	A	G	I
Query Conservation
Alig confidence																														.	.	.	.	.
Template Conservation																														.	.	.	.	.
Template Sequence		R	F	S	R	G	L	E	V	V	R	P	R	D	D	L	G	H	A	A	N	F	L	Y	M	M	F	G	R	.	.	.	.	.	E	P	D	P	L	A	S	R	G	I	D	L	Y	L	I	L	H	A	D	H	E	V	P	A	S	T	F	A	A	H	V	V	A	S	T	L	S	D	L	Y	S	S	V	A	A	A	I
Template Known Secondary structure					T	T								T	T	S												S	S	.	.	.	.	.																	T	S			S													T	T	T
Template Predicted Secondary structure																														.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.						.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		A	S	L	W	G	P	A	H	G	G	A	N	E	A	A	L	K	M	L	E	E	I	S	S	V	K	H	I	P	E	F	V	R	R	A	K	.	D	K	N	D	S	F	R	L	M	G	F	G	H	R	V	Y	K	N	Y	D	P	R	A	T	V	M	R	E	T	C	H	E	V	L	K	E	L	G	T	K	D	D	L
Query Conservation																																						.
Alig confidence																																						.					.	.
Template Conservation																																											.	.
Template Sequence		A	A	L	K	G	P	L	H	G	G	A	N	E	M	A	V	R	N	Y	L	E	I	G	T	P	A	K	A	K	E	I	V	E	A	A	T	K	P	G	G	P	.	.	K	L	M	G	V	G	H	R	V	Y	K	A	Y	D	P	R	A	K	I	F	K	E	F	S	R	D	Y	V	A	K	F	G	D	P	Q	N	L
Template Known Secondary structure					T	S	T	T	T	S																G	G	G								T	T	S	T	T			.	.			T	T	B			S	S		S	S																						T	T
Template Predicted Secondary structure																																											.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	V	A	M	E	L	E	N	I	A	L	N	D	P	Y	F	I	E	K	K	L	Y	P	N	V	D	F	Y	S	G	I	I	L	K	A	M	G	I	P	S	S	M	F	T	V	I	F	A	M	A	R	T	V	G	W	I	A	H	W	S	E	M	H	S	D	G	M	K	I	A	R	P	R	Q	L	Y	T	G	Y
Query Conservation
Alig confidence																																																																					.
Template Conservation																																																																					.
Template Sequence		F	A	I	A	S	A	I	E	Q	E	V	L	S	H	P	Y	F	Q	Q	R	K	L	Y	P	N	V	D	F	W	S	G	I	A	F	Y	Y	M	G	I	P	Y	E	Y	F	T	P	I	F	A	M	S	R	V	V	G	W	V	A	H	V	L	E	Y	W	E	N	N	.	R	I	F	R	P	R	A	C	Y	I	G	P
Template Known Secondary structure																					T	T			B		G	G	G	T									T			G	G	G																					G	G	G		.											S
Template Predicted Secondary structure																																																																					.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.		.	.	.	390	.	.	.	.	.	.	.	.
		417	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	R	D	F	K	S	D	I	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	D	L	Q	Y	I	P	L	E	Q	R
Template Known Secondary structure		S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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