 |
Job Description | P0ABH7 | Confidence | 5.31% | Date | Thu Jan 5 11:15:31 GMT 2012 |
Rank | 98 | Aligned Residues | 104 |
% Identity | 14% | Template | c1rr2A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:transcarboxylase 5s subunit; |
PDBTitle: propionibacterium shermanii transcarboxylase 5s subunit bound to 2-2 ketobutyric acid
|
Resolution | 2.00 Å |
|
 |
  |   |
301 | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | |
. | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | M | G | F | G | H | R | V | Y | K | N | Y | D | P | R | A | T | V | M | R | E | T | C | H | E | V | L | K | E | L | G | T | K | D | . |
D | L | L | E | V | A | M | E | L | E | N | I | A | L | N | D | P | Y | F | I | E | K | K | L | Y | P | N | V | D | F | Y | S | G | I | I | L | K | A | M | G | I | P | S | S | M |
Query Conservation |   |
|   |
|
|
|
|
|
|
|
|   |   |
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |
|   |   |   |
|   |   |   |
|
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |   |   | . | . | . |
|
|   |   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |
|
|
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   | . |   |   |   |   | . | . | . | . | . | . |
|   |   |
|   |   |
|
|
|   |
Template Sequence |   |
I | S | S | M | S | L | G | P | . |
. |
. |
G | H | N | P | T | E | S | V | A | E | M | L | E | G | T | G | Y | T | T | N | L | D | Y | D | R | L | H | K | I | R | D | H | F | K | A | I | R | P | K | Y | K | K | F | E | S | K | T | L | . |
V | D | T | S | . |
. |
. |
. |
. |
. |
I | F | K | S | Q | I | P | G | G | M |
Template Known Secondary structure |   |
| G | G | G |
| S | T | T | . | . | . | S | B |
| B |  |  |  |  |  |  | T | T | T | T | T | T |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | G | G | G | G |
|
| S |
| S | . |
|
|
| T | . | . | . | . | . | . |  |  |  |  |
|
|
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . |
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
242 | . | . | . | . | . | . | . | |
|
|
250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | |
. | . | 300 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 310 | . |
  |
  |   |
380 | . | . | . | . | . | . | . | . | . | 390 | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | T | V | I | F | A | M | A | R | T | V | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
W | I | A | H | W | S | E | M | H | S | D | G | M | K | I | A | R | P | R | Q | L | Y | T | G |
Query Conservation |   |
  |   |   |
|
|   |
|   |
|   |   |
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|   |   |
|
|   |   |   |   |   |
|
|   |
|
|   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   | . |   |   |
|
|
|   |
|
|   |
|
|
Template Sequence |   |
L | S | N | M | E | S | Q | L | R | A | Q | G | A | E | D | K | M | D | E | V | M | A | E | V | P | R | V | R | K | A | A | G | F | P | . |
P | L | V | T | P | S | S | Q | I | V | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T | T |
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| . |
| S |
| T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
312 | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | |
. | . | . | . | 350 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|