 |
| Job Description | P77688 | | Confidence | 89.87% | Date | Thu Jan 5 12:31:38 GMT 2012 |
| Rank | 249 | Aligned Residues | 28 |
| % Identity | 11% | Template | d2bgca1 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| CAP C-terminal domain-like
|
| Resolution | 2.3 |
|
| | |
24 | . | . | . | . | . | 30 | . | . | . | . | |
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . |
| Predicted Secondary structure | |
|  | | | | | | | |
|
| . |
| | | | | | | | | | | | | |
|
| |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
N | V | S | K | A | C | K | I | M | G | V | . |
S | R | D | T | F | Y | R | Y | R | E | L | V | A | E | G | G | V |
| Query Conservation | |
| | | | |
| | |
|
|
| . |
| | |
|
| |
|
| | |
|
| | | |
| |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | |
|
|
| | |
|
| | |
|
|
|
|
|
|
| |
| | |
| | | |
|
|
| Template Sequence | |
T | M | Q | E | L | G | Y | S | S | G | I | A | H | S | S | A | V | S | R | I | I | S | K | L | K | Q | E | K | V |
| Template Known Secondary structure | |
| | | | | | | | T | T |
|
|
| | | | | | | | | | | | | | T | T | S |
| Template Predicted Secondary structure | |
| | | | | | | | |
|
|
|
| | | | | | | | | | | | | |
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
