Return to main results Retrieve Phyre Job Id

Job DescriptionP77688
Confidence93.75%DateThu Jan 5 12:31:38 GMT 2012
Rank137Aligned Residues39
% Identity18%Templated1ixca1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain LysR-like transcriptional regulators
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........
Predicted Secondary structure 







Query SS confidence 






































Query Sequence  HKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAEG
Query Conservation   
  

 
   
 
    
  



  

 

  

   
Alig confidence 






































Template Conservation    
  
  
   

 
 

  
 






  
  

  
Template Sequence  RQLKYFIAVAEAGNXAAAAKRLHVSQPPITRQXQALEAD
Template Known Secondary structure  SST

Template Predicted Secondary structure 




Template SS confidence 






































   4.....10.........20.........30.........40..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions