Return to main results Retrieve Phyre Job Id

Job DescriptionP77688
Confidence80.87%DateThu Jan 5 12:31:38 GMT 2012
Rank433Aligned Residues39
% Identity0%Templatec3ivpD_
PDB info PDB header:dna binding proteinChain: D: PDB Molecule:putative transposon-related dna-binding protein; PDBTitle: the structure of a possible transposon-related dna-binding protein2 from clostridium difficile 630.
Resolution2.02 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40..
Predicted Secondary structure 










Query SS confidence 







































Query Sequence  HTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRY
Query Conservation           
  

 
   
 
    
  



  

 

Alig confidence 
















.





















Template Conservation    
   

  

  
  . 



 


   


   

  
Template Sequence  KYDFRALGLAIKEARKK. QGLTREQVGAXIEIDPRYLTNI
Template Known Secondary structure 



.TT

TS
Template Predicted Secondary structure 


.






Template SS confidence 







































   7..10.........20... ......30.........40.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions