Job Description P77688 Confidence 99.34% Date Thu Jan 5 12:31:38 GMT 2012 Rank 5 Aligned Residues 104 % Identity 11% Template c3hosA_ PDB info PDB header:transferase, dna binding protein/dna Chain: A: PDB Molecule:transposable element mariner, complete cds; PDBTitle: crystal structure of the mariner mos1 paired end complex with mg Resolution 3.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.								.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																										.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.
Query Sequence		I	K	H	K	A	G	L	L	N	L	A	E	E	L	S	N	V	S	K	A	C	K	I	M	.	.	.	.	.	.	.	G	V	S	R	D	T	F	Y	R	Y	R	E	L	V	A	E	G	G	V	D	A	Q	I	N	R	S	R	R	A	P	N	L	K	N	R	T	D	E	A	T	E	Q	A	V	V	D	Y	A	V
Query Conservation																										.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.																					.															.	.	.	.	.
Template Conservation																																																					.															.	.	.	.	.
Template Sequence		E	Q	T	R	T	V	L	I	F	C	F	H	L	K	K	T	A	A	E	S	H	R	M	L	V	E	A	F	G	E	Q	V	P	T	V	K	T	C	E	R	W	F	Q	R	F	K	S	G	D	F	D	.	V	D	D	K	E	H	G	K	P	P	K	R	Y	E	.	.	.	.	.	D	A	E	L	Q	A	L	L	D
Template Known Secondary structure														T	T														T		S		S															T	T				.	S	S										S	S		.	.	.	.	.
Template Predicted Secondary structure																																																					.															.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.						.	.	.	.	.	.	80	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	P	T	H	G	Q	H	R	A	S	N	E	L	R	K	Q	G	V	F	I	S	D	S	G	V	R	S	V	W	L	L	H	N	L	E	N	L	K	R	R	Y
Query Conservation
Alig confidence													.	.	.	.	.
Template Conservation													.	.	.	.	.
Template Sequence		E	D	D	A	Q	T	Q	K	Q	L	A	.	.	.	.	.	E	Q	L	E	V	S	Q	Q	A	V	S	N	R	L	R	E	M	G	K	I	Q	K	V	G	R	W
Template Known Secondary structure			S	S									.	.	.	.	.	T	T	T	T	S												T	T
Template Predicted Secondary structure													.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions