Return to main results Retrieve Phyre Job Id

Job DescriptionP77688
Confidence90.16%DateThu Jan 5 12:31:38 GMT 2012
Rank243Aligned Residues57
% Identity9%Templatec2v79B_
PDB info PDB header:dna-binding proteinChain: B: PDB Molecule:dna replication protein dnad; PDBTitle: crystal structure of the n-terminal domain of dnad from2 bacillus subtilis
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20... ......30.........40.........50.........60.........
Predicted Secondary structure 


...



















Query SS confidence 










. . .













































Query Sequence  AGLLNLAEELS. . . NVSKACKIMGVSRDTFYRYRELVAEGGVDAQINRSRRAPNLKNRTD
Query Conservation    

 
   
 ...
    
  



  

 

  

   
  

               
Alig confidence 










...













































Template Conservation 
 
          

   

   
 
   
   
  
  



 
       
     
 
Template Sequence  LKIKMHLEKGSYFPTPNQLQEGMSISVEECTNRLRMFIQKGFLFIEECEDQNGIKFEKYS
Template Known Secondary structure  TTT

S

TTSSS
TS

TTS
Template Predicted Secondary structure 



















Template SS confidence 



























































   3940.........50.........60.........70.........80.........90........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions