Job Description P77688 Confidence 83.85% Date Thu Jan 5 12:31:38 GMT 2012 Rank 378 Aligned Residues 58 % Identity 12% Template c2o8kA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:rna polymerase sigma factor rpon; PDBTitle: nmr structure of the sigma-54 rpon domain bound to the-242 promoter element Resolution UNK

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	N	R	T	D	E	A	T	E	Q	A	V	V	D	Y	A	V	A	F	P	T	H	G	Q	H	R	A	S	N	E	L	R	K	Q	G	V	F	I	S	D	S	G	V	R	S	V	W	L	L	H	N	L	E	N	L	K	R	R
Query Conservation
Alig confidence																							.
Template Conservation																							.
Template Sequence		T	Q	G	E	L	M	K	L	I	K	E	I	V	E	N	E	D	K	R	K	P	.	Y	S	D	Q	E	I	A	N	I	L	K	E	K	G	F	K	V	A	R	R	T	V	A	K	Y	R	E	M	L	G	I	P	S	S	R	E	R
Template Known Secondary structure			S	S	T	T									T	T	S		T	T	S		.														T																T		S		S
Template Predicted Secondary structure																							.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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