Job Description P77688 Confidence 98.48% Date Thu Jan 5 12:31:38 GMT 2012 Rank 7 Aligned Residues 107 % Identity 8% Template c1hlvA_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:major centromere autoantigen b; PDBTitle: crystal structure of cenp-b(1-129) complexed with the cenp-2 b box dna Resolution 2.50 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.							.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																.	.																											.	.	.	.	.	.
Query SS confidence																.	.																											.	.	.	.	.	.
Query Sequence		I	K	H	K	A	G	L	L	N	L	A	E	E	L	.	.	S	N	V	S	K	A	C	K	I	M	G	V	S	R	D	T	F	Y	R	Y	R	E	L	V	A	E	.	.	.	.	.	.	G	G	V	D	A	Q	I	N	R	S	R	R	A	P	N	L	K	N	R	T	D	E	A	T	E	Q	A	V	V	D	Y	A
Query Conservation																.	.																											.	.	.	.	.	.
Alig confidence																.	.																											.	.	.	.	.	.
Template Conservation
Template Sequence		F	R	E	K	S	R	I	I	Q	E	V	E	E	N	P	D	L	R	K	G	E	I	A	R	R	F	N	I	P	P	S	T	L	S	T	I	L	K	N	K	R	A	I	L	A	S	E	R	K	Y	G	V	A	S	T	C	R	K	T	N	K	L	S	P	Y	D	K	L	E	G	L	L	I	A	W	F	Q	Q	I	R
Template Known Secondary structure																T	T	S										T												T												G	G	G	G	G	T								T	T															G
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.								.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.
Query Sequence		V	A	F	P	T	H	G	Q	H	R	A	S	N	E	L	R	K	Q	.	.	.	.	.	.	.	G	V	F	I	S	D	S	G	V	R	S	V	W	L	L	H	N
Query Conservation																				.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	G	L	P	V	K	G	I	I	L	K	E	K	A	L	R	I	A	E	E	L	G	M	D	D	F	T	A	S	N	G	W	L	D	R	F	R	R	R	R	S
Template Known Secondary structure		G	G	T																				T		T	T															T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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