Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEU0
Confidence99.94%DateThu Jan 5 11:24:14 GMT 2012
Rank33Aligned Residues217
% Identity15%Templated2f34a1
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.74

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40........ .50.........60.........70.........80.... ...
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Query Sequence  NIRIGTDPTYAPFESKNSQGEL. . . . . . . VGFDIDLAKELCKRINTQCTFVENPLDALIPSLKAK. . . . . . . . . . . . KID
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Template Sequence  TLIVTTI. LEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRAD
Template Known Secondary structure 

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BTTTB
S

S


GGGGST


TT




B
TTS
B
TTS
S
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   5....10. ........20.........30.........40.........50.........60.........70.........80...
 
   88.90.........100.........110.........120.........130.........140.........150..... ..
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Query Sequence  AIMSSLSITEKRQQEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPK. . . . . . . . . . GI
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Template Sequence  LAVAPLTITYVREKVIDFSKPFMTLGISILYRKPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQ
Template Known Secondary structure 
SS
B

TT
S
S




ST
SSS
BTTS


T
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   158.160.........170.........180.........190.........200.........210.........220.........230.......
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Query Sequence  EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKAFA
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Template Sequence  QSALVKNSDEGIQRVLTTDYALLMESTSIEYVTQRNCN. . . . . . . . . LTQIGGLIDSKGYGVGTPIGSP. YRDKITIAIL
Template Known Secondary structure  SBSSSS
TT.........SS
SS


TT
T.T
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   166...170.........180.........190.........200... ......210.........220..... ....230.....
 
   238.240.........250....
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Query Sequence  EMRADGTYEKLAKKYFD
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Template Sequence  QLQEEGKLHMMKEKWWR
Template Known Secondary structure  TT
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   236...240.........250..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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