Job Description P0AEU0 Confidence 100.00% Date Thu Jan 5 11:24:14 GMT 2012 Rank 11 Aligned Residues 226 % Identity 27% Template c3kzgB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:arginine 3rd transport system periplasmic binding PDBTitle: crystal structure of an arginine 3rd transport system2 periplasmic binding protein from legionella pneumophila Resolution 2.06 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		P	Q	N	I	R	I	G	T	D	P	T	Y	A	P	F	E	S	K	.	N	S	Q	G	E	L	V	G	F	D	I	D	L	A	K	E	L	C	K	R	I	N	T	Q	C	T	F	V	E	N	P	L	D	A	L	I	P	S	L	K	A	K	K	I	D	A	I	M	S	S	L	S	I	T	E	K	R	Q	Q	E	I
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		S	L	N	L	T	I	G	T	S	K	F	N	P	P	F	E	V	W	S	G	N	N	S	S	L	Y	G	F	D	I	D	L	X	Q	E	I	C	R	R	L	H	A	T	C	T	F	E	A	Y	I	F	D	D	L	F	P	A	L	K	N	R	E	V	D	L	V	I	A	S	X	I	I	T	D	E	R	K	K	H	F
Template Known Secondary structure											S			T	T	T						T	T	S				S														T										G	G	G							T	T	S	S	S				S	S		B							T	T
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	T	D	K	L	Y	A	A	D	S	R	L	V	V	A	K	N	S	D	I	Q	P	T	V	E	S	L	K	G	K	R	V	G	V	L	Q	G	T	T	Q	E	T	F	G	N	E	H	W	A	P	K	G	I	E	I	V	S	Y	Q	G	Q	D	N	I	Y	S	D	L	T	A	G	R	I	D	A	A	F	Q	D
Query Conservation
Alig confidence																		.																																		.	.
Template Conservation																		.																																		.	.
Template Sequence		I	F	S	L	P	Y	X	E	S	N	S	Q	Y	I	T	T	.	V	D	S	K	I	S	T	F	D	D	L	H	G	K	K	I	G	V	R	K	G	T	P	Y	A	R	Q	V	L	S	E	N	R	.	.	N	N	Q	V	I	F	Y	E	L	I	Q	D	X	L	L	G	L	S	N	N	Q	V	D	A	S	L	X	D
Template Known Secondary structure							S	B										.	T	T		S			S	G	G	G	G	T	T							T	T	S	T								T		S	.	.								S	S										T	T	S	S	S
Template Predicted Secondary structure																		.																																		.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		E	V	A	A	S	E	G	F	L	K	Q	P	V	G	K	D	Y	K	F	G	G	P	S	V	K	.	D	E	K	L	F	G	V	G	T	G	M	G	L	R	K	E	D	N	E	L	R	E	A	L	N	K	A	F	A	E	M	R	A	D	G	T	Y	E	K	L	A	K	K	Y	F
Query Conservation																											.
Alig confidence																											.
Template Conservation
Template Sequence		Y	E	A	A	K	Y	W	X	A	S	E	P	Y	A	Y	K	L	I	G	K	K	Y	K	L	I	G	K	K	I	S	I	G	E	G	Y	S	I	X	A	N	P	D	Q	F	V	L	I	K	K	I	N	K	I	L	L	E	X	E	A	D	G	T	Y	L	R	L	Y	S	E	Y	F
Template Known Secondary structure								T	T	S	S	S		S	S		T	T	T			S											T	T		B						G	G	G																		T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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