Job Description P0AEU0 Confidence 56.74% Date Thu Jan 5 11:24:14 GMT 2012 Rank 82 Aligned Residues 182 % Identity 18% Template c2zzxD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:abc transporter, solute-binding protein; PDBTitle: crystal structure of a periplasmic substrate binding protein in2 complex with lactate Resolution 1.75 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.							.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	A	K	E	L	C	K	R	I	N	T	Q	C	T	F	V	E	N	P	L	.	.	.	.	.	.	D	A	L	I	P	S	L	K	A	K	K	I	D	A	I	M	S	S	L	S	I	T	E	K	R	Q	Q	E	I	A	F	T	D	K	L	Y	A	A	D	S	R	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	F	T	E	R	V	K	E	L	T	D	G	Q	L	E	V	Q	P	F	P	A	G	A	V	V	G	T	F	D	M	F	D	A	V	K	T	G	V	L	D	G	M	N	P	F	T	L	Y	W	A	G	R	M	P	V	T	A	F	L	S	S	Y	A	L	G	L	D	R	P	D	Q	W	E	T	W	F	Y	S	L	G
Template Known Secondary structure											T	T	T	S								T	T	S	S	S		G	G	G								T	S	S	S					B	G	G	G	G	T	T	T		G	G	G	G	G	S	S			T	T	S			S										T	S	S
Template Predicted Secondary structure
Template SS confidence
		3054	.	.	.	.	.	3060	.	.	.	.	.	.	.	.	.	3070	.	.	.	.	.	.	.	.	.	3080	.	.	.	.	.	.	.	.	.	3090	.	.	.	.	.	.	.	.	.	3100	.	.	.	.	.	.	.	.	.	3110	.	.	.	.	.	.	.	.	.	3120	.	.	.	.	.	.	.	.	.	3130	.	.	.
																									116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	V	A	K	N	S	D	I	Q	P	T	V	E	S	L	K	G	K	R	V	G	V	L	Q	G	T	T	Q	E	T	F	G	N	E	H	W	A	P	K	G	I	E	I	V	S	Y	Q	G	Q	D	N	I	Y	S	D	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.																			.	.	.	.	.
Template Conservation																																																.																			.	.	.	.	.
Template Sequence		G	L	D	I	A	R	R	A	F	A	E	Q	G	L	F	Y	V	G	P	V	Q	H	D	L	N	I	I	H	S	K	K	P	I	R	R	F	E	D	F	K	G	V	K	L	R	V	.	P	G	G	M	I	A	E	V	F	A	A	A	G	A	S	T	V	L	.	.	.	.	.	L	P	G	G	E	V	Y	P	A	L
Template Known Secondary structure												T	T	T																	S	S				S	G	G	G	G	T	T						.		S										T	T						.	.	.	.	.			G	G	G
Template Predicted Secondary structure																																																.																			.	.	.	.	.
Template SS confidence
		3134	.	.	.	.	.	3140	.	.	.	.	.	.	.	.	.	3150	.	.	.	.	.	.	.	.	.	3160	.	.	.	.	.	.	.	.	.	3170	.	.	.	.	.	.	.	.	.		3180	.	.	.	.	.	.	.	.	.	3190	.	.	.	.	.	.	.						.	.	3200	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.						.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																						.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.
Query Sequence		T	A	G	R	I	D	A	A	F	Q	D	E	V	A	A	S	E	G	F	L	K	Q	P	V	G	K	D	Y	K	F	G	G	P	S	V	K	D	E	K	L	F	G	V	G	T	G	M	G	L	R	K	E	.	.	.	.	.	D	N	E	L	R	E	A	L	N	K	A	F	A	E	M	R	A
Query Conservation																																																						.	.	.	.	.
Alig confidence																																																						.	.	.	.	.
Template Conservation
Template Sequence		E	R	G	V	I	D	A	A	D	F	V	G	P	A	V	N	Y	N	L	G	F	H	Q	V	A	K	Y	I	I	M	G	P	P	E	T	P	A	I	H	Q	P	V	D	L	M	D	F	T	I	N	L	N	R	W	R	S	L	P	K	P	L	Q	E	R	F	I	A	A	V	H	E	Y	S	W
Template Known Secondary structure			T	T	S		S					S								T	T													T	T	S	S		S	S		S	S															S
Template Predicted Secondary structure
Template SS confidence
		3208	.	3210	.	.	.	.	.	.	.	.	.	3220	.	.	.	.	.	.	.	.	.	3230	.	.	.	.	.	.	.	.	.	3240	.	.	.	.	.	.	.	.	.	3250	.	.	.	.	.	.	.	.	.	3260	.	.	.	.	.	.	.	.	.	3270	.	.	.	.	.	.	.	.	.	3280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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