Job Description P0AEU0 Confidence 100.00% Date Thu Jan 5 11:24:14 GMT 2012 Rank 9 Aligned Residues 233 % Identity 25% Template c2q2aD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:artj; PDBTitle: crystal structures of the arginine-, lysine-, histidine-2 binding protein artj from the thermophilic bacterium3 geobacillus stearothermophilus Resolution 1.79 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	T	A	A	F	A	A	I	P	Q	N	I	R	I	G	T	D	P	T	Y	A	P	F	E	S	K	N	S	Q	G	E	L	V	G	F	D	I	D	L	A	K	E	L	C	K	R	I	N	T	Q	C	T	F	V	E	N	P	L	D	A	L	I	P	S	L	K	A	K	K	I	D	A	I	M	S	S	L	S	I
Query Conservation
Alig confidence																														.
Template Conservation																														.
Template Sequence		S	S	G	G	D	G	G	A	T	K	K	K	V	V	V	G	T	D	A	A	F	A	P	F	E	Y	M	Q	.	K	G	K	I	V	G	F	D	V	D	L	L	D	A	V	M	K	A	A	G	L	D	Y	E	L	K	N	I	G	W	D	P	L	F	A	S	L	Q	S	K	E	V	D	M	G	I	S	G	I	T	I
Template Known Secondary structure			T	T	S		T	T	S	S												B	T	T	T	B				.	T	T				S													T	T																				T	S	S					S	S		B
Template Predicted Secondary structure																														.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	K	R	Q	Q	E	I	A	F	T	D	K	L	Y	A	A	D	S	R	L	V	V	A	K	N	S	D	I	Q	P	T	V	E	S	L	K	G	K	R	V	G	V	L	Q	G	T	T	Q	E	T	F	G	N	E	H	W	A	P	K	G	I	E	I	V	S	Y	Q	G	Q	D	N	I	Y	S	D	L	T	A	G
Query Conservation
Alig confidence																																																												.	.
Template Conservation																																																												.	.
Template Sequence		T	D	E	R	K	Q	S	Y	D	F	S	D	P	Y	F	E	A	T	Q	V	I	L	V	K	Q	G	S	P	V	K	N	A	L	D	L	K	G	K	T	I	G	V	Q	N	A	T	T	G	Q	E	A	A	E	K	L	F	G	K	.	.	G	P	H	I	K	K	F	E	T	T	V	V	A	I	M	E	L	L	N	G
Template Known Secondary structure							T	T					S													T	T					S	G	G	G	G	T	T	S						T	T	S												S	.	.	S	T	T					S	S										T	T
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	D	A	A	F	Q	D	E	V	A	A	S	E	G	F	L	K	Q	P	V	G	K	D	Y	K	F	G	G	P	S	V	K	D	E	K	L	F	G	V	G	T	G	M	G	L	R	K	E	D	N	E	L	R	E	A	L	N	K	A	F	A	E	M	R	A	D	G	T	Y	E	K	L	A	K	K	Y	F	D	F
Query Conservation
Alig confidence																												.	.	.	.	.
Template Conservation																												.	.	.	.	.
Template Sequence		G	V	D	A	V	I	T	D	N	A	V	A	N	E	Y	V	K	N	N	P	N	K	K	L	Q	V	.	.	.	.	.	I	E	D	P	K	N	F	A	S	E	Y	Y	G	M	I	F	P	K	N	S	E	L	K	A	K	V	D	E	A	L	K	N	V	I	N	S	G	K	Y	T	E	I	Y	K	K	W	F	G	K
Template Known Secondary structure		S	S	S																	G	G	G					.	.	.	.	.				T	T	T	S											T	T		T																T											S	S
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.						.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		256
Predicted Secondary structure
Query SS confidence
Query Sequence		D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		243

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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