Job Description P0AEU0 Confidence 42.39% Date Thu Jan 5 11:24:14 GMT 2012 Rank 86 Aligned Residues 174 % Identity 12% Template c2pfzA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative exported protein; PDBTitle: crystal structure of dctp6, a bordetella pertussis2 extracytoplasmic solute receptor binding pyroglutamic acid Resolution 1.80 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.							.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	A	K	E	L	C	K	R	I	N	T	Q	C	T	F	V	E	N	P	L	.	.	.	.	.	.	D	A	L	I	P	S	L	K	A	K	K	I	D	A	I	M	S	S	L	S	I	T	E	K	R	Q	Q	E	I	A	F	T	D	K	L	Y	A	A	D	S	R	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	F	V	K	D	V	D	S	L	S	G	G	K	L	K	I	T	L	H	N	N	A	S	L	Y	K	A	P	E	I	K	R	A	V	Q	G	N	Q	A	Q	I	G	E	I	L	L	T	N	F	A	N	E	D	P	V	Y	E	L	D	G	L	P	F	L	A	T	G	Y	D	A	S	F	K	L	Y	Q	A	Q	K	P
Template Known Secondary structure												T	T	S								T	T	S	S	S		G	G	G							T	T	S	S	S						G	G	G	G	T	T	T		G	G	G	T	G	G	G	S	T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
																						116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	V	A	K	N	S	D	I	Q	P	T	V	E	S	L	K	G	K	R	V	G	V	L	Q	G	T	T	Q	E	T	F	G	N	E	H	W	A	P	K	G	I	E	I	V	S	Y	Q	G	Q	D	N	I	Y	S	D	L	T	A	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																.	.	.	.	.
Template Conservation																																														.																.	.	.	.	.
Template Sequence		F	L	E	K	K	L	A	S	Q	G	M	M	L	L	Y	S	V	A	W	P	P	Q	G	I	F	A	N	R	D	I	K	Q	V	S	D	M	K	G	L	K	W	R	A	Y	.	S	P	V	T	A	K	I	A	E	L	V	G	A	Q	P	.	.	.	.	.	V	T	V	Q	Q	A	E	L	A	Q	A	M	A	T	G
Template Known Secondary structure									T	T	T																	S	S			S	S	G	G	G	G	T	T						S	.	S											T				.	.	.	.	.					G	G	G							T	T
Template Predicted Secondary structure																																														.																.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160						.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.						.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																			.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.
Query Sequence		R	I	D	A	A	F	Q	D	E	V	A	A	S	E	G	F	L	K	Q	P	V	G	K	D	Y	K	F	G	G	P	S	V	K	D	E	K	L	F	G	V	G	T	G	M	G	L	R	K	E	.	.	.	.	.	D	N	E	L	R	E	A	L	N	K	A	F	A	E	M	R	A
Query Conservation																																																			.	.	.	.	.
Alig confidence														.															.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation														.															.	.	.	.	.	.	.
Template Sequence		V	I	D	S	Y	M	S	S	G	S	T	G	.	F	D	T	K	T	Y	E	Y	I	K	K	F	Y	D	.	.	.	.	.	.	.	T	E	A	W	L	P	K	N	A	V	L	V	N	K	K	A	F	D	A	L	D	P	A	T	Q	Q	A	L	K	K	A	G	A	Q	A	E	E
Template Known Secondary structure		S		S										.			T	T	G	G	G	T							.	.	.	.	.	.	.																			T	S
Template Predicted Secondary structure														.															.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.								.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions