Job Description P39305 Confidence 84.32% Date Thu Jan 5 11:59:09 GMT 2012 Rank 115 Aligned Residues 202 % Identity 16% Template d2zdra2 SCOP info TIM beta/alpha-barrel Aldolase NeuB-like Resolution 1.85

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.																					.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	R	R
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		F	E	M	V	D	A	A	Y	N	A	G	A	E	V	V	K	H	Q	T	H	I	V	E	D	E	M	S	D	E	A	K	Q	V	I	P	G	N	A	D	V	S	I	Y	E	I	M	E	R	C	A	L	N	E	E	D	E	I	K	L	K	E	Y	V	E	S	K	G	M	I	F	I	S	T	P	F	S	.	.	.	.
Template Known Secondary structure												T		S															G	G	G	G	G				T	T		S	S																										T	T									S	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	V	T	L	A	M	E	I	M	D	Y	P	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	A	A	L	R	L	Q	R	M	D	I	P	A	Y	K	I	G	S	G	E	C	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	L	I	K	L	V	A	S	F	G	K	P	I	I	L	S	T	G	.	M	N	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T		S						G	G	G	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T		S							T	.	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
																				114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.																										.	.
Query SS confidence																							.																										.	.
Query Sequence		M	S	S	I	S	K	A	L	G	Y	A	H	Y	L	N	N	P	W	F	Q	L	.	Y	P	D	I	G	N	L	S	A	W	D	N	D	V	Q	M	E	L	Q	A	G	I	G	H	I	.	.	V	A	V	H	V	K	D	T	K	P	G	V	F	K	N	V	P	F	G	E	G	V	V	D	F	E	R	C	F	E	T
Query Conservation																							.																										.	.
Alig confidence																							.																.										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	S	I	K	K	S	V	E	I	I	R	E	A	G	V	P	Y	A	L	L	H	C	T	N	I	Y	P	T	P	Y	E	D	V	R	L	G	.	G	M	N	D	L	S	E	A	F	P	D	A	I	I	G	L	S	D	H	T	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Y	A	C
Template Known Secondary structure																T												S	S			G	G	G			T	T	.										T	T	S								S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																							.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.																	.	220	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.										.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.											.	.	.	.	.	.	.	.	.
Query SS confidence															.											.	.	.	.	.	.	.	.	.
Query Sequence		L	K	Q	S	G	Y	C	G	P	Y	L	I	E	.	M	W	S	E	T	A	E	D	P	A	.	.	.	.	.	.	.	.	.	A	E	V	A	K	A	R	D	W	V	K	A	R	M	A	K	A	G
Query Conservation															.											.	.	.	.	.	.	.	.	.
Alig confidence								.							.											.	.	.	.	.	.	.	.	.
Template Conservation								.
Template Sequence		L	G	A	V	A	L	.	G	G	S	I	L	E	R	H	F	T	D	R	M	D	R	P	G	P	D	I	V	C	S	M	N	P	D	T	F	K	E	L	K	Q	G	A	H	A	L	K	L	A	R	G
Template Known Secondary structure							T	.	T								B		S		T	T			S	T	T	G	G	G		B																			S
Template Predicted Secondary structure								.
Template SS confidence
		223	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions