Job Description P39305 Confidence 100.00% Date Thu Jan 5 11:59:09 GMT 2012 Rank 28 Aligned Residues 269 % Identity 18% Template d2glka1 SCOP info TIM beta/alpha-barrel Xylose isomerase-like Xylose isomerase Resolution 0.94

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		P	L	G	I	Y	E	K	A	L	P	A	G	E	C	W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	R	R	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence								.	.	.																																																																			.	.	.	.	.
Template Conservation								.	.	.
Template Sequence		P	F	G	D	A	T	.	.	.	R	R	A	L	D	P	V	E	S	V	R	R	L	A	E	L	G	A	H	G	V	T	F	H	D	D	D	L	I	P	F	G	S	S	D	S	E	R	E	E	H	V	K	R	F	R	Q	A	L	D	D	T	G	M	K	V	P	M	A	T	T	N	L	F	T	H	P	V	F	K	D
Template Known Secondary structure		T	T	B			S	.	.	.	S															T	T												S		T	T																					T		B									S	S	S	G	G	G	T	T
Template Predicted Secondary structure								.	.	.
Template SS confidence
		25	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.																														.	.
Query SS confidence																																									.	.	.	.																														.	.
Query Sequence		F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	G	Y	D	.	.	.	.	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	.	.	V	T	L	A	M	E
Query Conservation																																									.	.	.	.																														.	.
Alig confidence																																									.	.	.	.																														.	.
Template Conservation
Template Sequence		G	G	F	T	A	N	D	R	D	V	R	R	Y	A	L	R	K	T	I	R	N	I	D	L	A	V	E	L	G	A	E	T	Y	V	A	W	G	G	R	E	G	A	E	S	G	G	A	K	D	V	R	D	A	L	D	R	M	K	E	A	F	D	L	L	G	E	Y	V	T	S	Q	G	Y	D	I	R	F	A	I	E
Template Known Secondary structure			S	T	T		S	S																					T	T		S							T	T				S	S	G	G	G																									T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		156	.	.	.						160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.
Predicted Secondary structure						.	.	.	.	.																					.																							.	.																						.
Query SS confidence						.	.	.	.	.																					.																							.	.																						.
Query Sequence		I	M	D	Y	.	.	.	.	.	P	L	M	S	S	I	S	K	A	L	G	Y	A	H	Y	L	N	N	P	W	.	F	Q	L	Y	P	D	I	G	N	L	S	A	W	D	N	D	V	Q	M	E	L	Q	.	.	A	G	I	G	H	I	V	A	V	H	V	K	D	T	K	P	G	V	F	K	N	.	V	P	F	G
Query Conservation						.	.	.	.	.																					.																							.	.																						.
Alig confidence						.	.	.	.	.																					.																							.	.																						.
Template Conservation
Template Sequence		P	K	P	N	E	P	R	G	D	I	L	L	P	T	V	G	H	A	L	A	F	I	E	R	L	E	R	P	E	L	Y	G	V	N	P	E	V	G	H	E	Q	M	A	G	L	N	F	P	H	G	I	A	Q	A	L	W	A	G	K	L	F	H	I	D	L	N	G	Q	N	G	I	K	Y	D	Q	D	L	R	F	G
Template Known Secondary structure				S	S	S	S	S	S			S	S		S									T	T	S	S	S	G	G	G						B						T	T	T													T	T		B							B			S	S	S	S				B		T	T
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		227	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.				.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure							.																																.	.	.
Query SS confidence							.																																.	.	.
Query Sequence		E	G	V	V	D	.	F	E	R	C	F	E	T	L	K	Q	S	G	Y	C	G	P	Y	L	I	E	M	W	S	E	T	A	E	D	P	A	A	.	.	.	E	V	A	K	A	R	D	W	V	K	A	R	M	A	K	A
Query Conservation							.																																.	.	.
Alig confidence							.																																.	.	.
Template Conservation
Template Sequence		A	G	D	L	R	A	A	F	W	L	V	D	L	L	E	S	A	G	Y	S	G	P	R	H	F	D	F	K	P	P	R	T	E	D	F	D	G	V	W	A	S	A	A	G	C	M	R	N	Y	L	I	L	K	E	R	A
Template Known Secondary structure		S	S																T			S										T	T
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions