Job Description P39305 Confidence 100.00% Date Thu Jan 5 11:59:09 GMT 2012 Rank 30 Aligned Residues 239 % Identity 16% Template d1yx1a1 SCOP info TIM beta/alpha-barrel Xylose isomerase-like KguE-like Resolution 1.80

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		7	.	.	10	.	.	.	.	.	.					.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		P	L	G	I	Y	E	K	A	L	P	.	.	.	.	A	G	E	C	W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	R	R	F
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.
Template Sequence		P	V	S	I	S	L	S	S	Y	G	A	D	L	V	R	S	R	G	Q	A	S	F	L	P	L	L	A	X	A	G	A	Q	R	V	E	L	R	E	E	L	F	A	G	P	P	D	.	.	.	.	.	.	.	.	T	E	A	L	T	A	A	I	Q	L	Q	G	L	E	C	V	F	S	S	P	L	E	L	W	R	E
Template Known Secondary structure							G	G	G	G										G	G	G	G								T		S						G	G	G		S	S				.	.	.	.	.	.	.	.											T	T														T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50									.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	V	T	L	A	M	E	I	M	D	Y	P	L	M
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	.	.	.	.	.	.	.	.	.	G	Q	L	N	P	E	L	E	P	T	L	R	R	A	E	A	C	G	A	G	W	L	K	V	S	L	G	L	L	P	E	Q	P	D	.	.	.	.	.	.	.	.	.	.	.	L	A	A	L	G	R	R	L	A	R	H	G	L	Q	L	L	V	E	N	D	Q	T	P	Q	G
Template Known Secondary structure		T	.	.	.	.	.	.	.	.	.	S	S	B		T	T											T	T		S											S	S			.	.	.	.	.	.	.	.	.	.	.									T	T	S	S									S	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77										.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.												.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.																																													.
Query SS confidence																		.	.																																													.
Query Sequence		S	S	I	S	K	A	L	G	Y	A	H	Y	L	N	N	P	.	.	W	F	Q	L	Y	P	D	I	G	N	L	S	A	W	D	N	D	V	Q	M	E	L	Q	A	G	I	G	H	I	V	A	V	H	V	K	D	T	K	P	G	V	F	K	N	.	V	P	F	G	E	G	V	V	D	F	E	R	C	F	E	T	L
Query Conservation																		.	.																																													.
Alig confidence																		.	.																																													.
Template Conservation
Template Sequence		G	R	I	E	V	L	E	R	F	F	R	L	A	E	R	Q	Q	L	D	L	A	X	T	F	D	I	G	N	W	R	W	Q	E	Q	A	A	D	E	A	A	L	R	L	G	R	Y	V	G	Y	V	H	C	K	A	V	I	R	N	R	D	G	K	L	V	A	V	P	P	S	A	A	D	L	Q	Y	W	Q	R	L	L
Template Known Secondary structure																	T	T		S							T	T	G	G	G	G	G	T											G	G	G													T	T	S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	S	G	Y	C	G	P	Y	L	I	E	M	W	S	E	T	A	E	D	P	A	A	E	V	A	K	A	R	D	W	V	K	A	R
Query Conservation
Alig confidence																		.
Template Conservation																		.
Template Sequence		Q	H	F	P	E	G	V	A	R	A	I	E	Y	P	L	Q	.	G	D	D	L	L	S	L	S	R	R	H	I	A	A	L	A	R	L
Template Known Secondary structure		T	T	S		T	T							S				.	S	S															T	S
Template Predicted Secondary structure																		.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions