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Job DescriptionP39305
Confidence99.96%DateThu Jan 5 11:59:09 GMT 2012
Rank35Aligned Residues267
% Identity14%Templated1xlma_
SCOP infoTIM beta/alpha-barrel Xylose isomerase-like Xylose isomerase
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  PLGIYEKALPAGECWLERLQLAKTLGFDFVEMSVDETDDRLSRLNWSREQRLALVNAIVETGVRVPSMCLSAHRRF. . . .
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Template Sequence  PFGVAT. . . RKNLDPVEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDTGLKVPMVTTNLFSHPVFKD
Template Known Secondary structure  TTB


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SSSGGGTT
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Query Sequence  . PLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQ. . . . EANNETRRRFRDGLKESVEMASRAQVTLAM. . .
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Template Sequence  GGFTSNDRSIRRFALAKVLHNIDLAAEMGAETFVMWGGREGSEYDGSKDLAAALDRMREGVDTAAGYIKDKGYNLRIALE
Template Known Secondary structure 
STT
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Query Sequence  . . . . EIMDYPLMSSISKALGYAHYLNNP. WFQLYPDIGNLSAWDNDVQM. . ELQAGIGHIVAVHVKD. TKPGVFKNVPFG
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Template Sequence  PKPNEPRGDIFLPTVGHGLAFIEQLEHGDIVGLNPETGHEQMAGLNFTHGIAQALWAEKLFHIDLNGQRGIKYEQELVFG
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   227..230.........240 .........250.........260.........270......
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Query Sequence  EGVVDFERCFETLK. . . . . . . QSGYCGPYLIEMWSETAEDPAAEVAKARDWVKARMA
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Template Sequence  HGDLTSAFFTVDLLENGFPNGGPKYTGPRHFDYKPSRTDGYDGVWDSAKANMSMYLL
Template Known Secondary structure  SS


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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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