Job Description P39305 Confidence 100.00% Date Thu Jan 5 11:59:09 GMT 2012 Rank 27 Aligned Residues 267 % Identity 16% Template d1xima_ SCOP info TIM beta/alpha-barrel Xylose isomerase-like Xylose isomerase Resolution 2.20

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.						.	80	.
Predicted Secondary structure																																																																										.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.
Query Sequence		P	L	G	I	Y	E	K	A	L	P	A	G	E	C	W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	.	.	.	.	.	H	R	R
Query Conservation																																																																										.	.	.	.	.
Alig confidence								.	.	.																																																																.	.	.	.	.
Template Conservation								.	.	.
Template Sequence		A	F	G	D	A	T	.	.	.	R	T	A	L	D	P	V	E	A	V	H	K	L	A	E	I	G	A	Y	G	I	T	F	H	D	D	D	L	V	P	F	G	S	D	A	Q	T	R	D	G	I	I	A	G	F	K	K	A	L	D	E	T	G	L	I	V	P	M	V	T	T	N	L	F	T	H	P	V	F	K	D
Template Known Secondary structure		T	T	B			S	.	.	.	S																T		S					B					S		T	T																					T		B									S	S	S	G	G	G	T	T
Template Predicted Secondary structure								.	.	.
Template SS confidence
		25	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.																													.	.
Query SS confidence																																										.	.	.	.																													.	.
Query Sequence		F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	G	Y	D	V	.	.	.	.	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	.	.	V	T	L	A	M	E
Query Conservation																																										.	.	.	.																													.	.
Alig confidence																																										.	.	.	.																													.	.
Template Conservation
Template Sequence		G	G	F	T	S	N	D	R	S	V	R	R	Y	A	I	R	K	V	L	R	Q	M	D	L	G	A	E	L	G	A	K	T	L	V	L	W	G	G	R	E	G	A	E	Y	D	S	A	K	D	V	S	A	A	L	D	R	Y	R	E	A	L	N	L	L	A	Q	Y	S	E	D	R	G	Y	G	L	R	F	A	I	E
Template Known Secondary structure			S	T	T		S	S																						T									T	T	S			S	S	G	G	G																									T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		156	.	.	.	160						.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.																			.																							.	.																		.
Query SS confidence							.	.	.	.	.																			.																							.	.																		.
Query Sequence		I	M	D	Y	P	.	.	.	.	.	L	M	S	S	I	S	K	A	L	G	Y	A	H	Y	L	N	N	P	.	W	F	Q	L	Y	P	D	I	G	N	L	S	A	W	D	N	D	V	Q	M	E	L	.	.	Q	A	G	I	G	H	I	V	A	V	H	V	K	D	T	K	P	.	G	V	F	K	N	V	P	F	G
Query Conservation							.	.	.	.	.																			.																							.	.																		.
Alig confidence							.	.	.	.	.																			.																							.	.																		.
Template Conservation
Template Sequence		P	K	P	N	E	P	R	G	D	I	L	L	P	T	A	G	H	A	I	A	F	V	Q	E	L	E	R	P	E	L	F	G	I	N	P	E	T	G	H	E	Q	M	S	N	L	N	F	T	Q	G	I	A	Q	A	L	W	H	K	K	L	F	H	I	D	L	N	G	Q	H	G	P	K	F	D	Q	D	L	V	F	G
Template Known Secondary structure				S	S	S	S	S	S			S	S		S									T	T	S	S	S	G	G	G						B						T	T	T														T		B							B			S	S	S	S				B		T	T
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.							.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.
Query Sequence		E	G	V	V	D	F	E	R	C	F	E	T	L	K	Q	S	G	.	.	.	.	.	.	Y	C	G	P	Y	L	I	E	M	W	S	E	T	A	E	D	P	A	A	E	V	A	K	A	R	D	W	V	K	A	R	M	A
Query Conservation																			.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.
Template Conservation
Template Sequence		H	G	D	L	L	N	A	F	S	L	V	D	L	L	E	N	G	P	D	G	A	P	A	Y	D	G	P	R	H	F	D	Y	K	P	S	R	T	E	D	Y	D	G	V	W	E	S	A	K	A	N	I	R	M	Y	L	L
Template Known Secondary structure		S	S	S													S		G	G	G	S		S			S										T	T
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions