Return to main results Retrieve Phyre Job Id

Job DescriptionP39305
Confidence40.29%DateThu Jan 5 11:59:09 GMT 2012
Rank323Aligned Residues178
% Identity12%Templated1v6ta_
SCOP info7-stranded beta/alpha barrel Glycoside hydrolase/deacetylase LamB/YcsF-like
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EIMRKAIQFAQDVGIRVIQLA. . . . . . . GYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMSSISKAL
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Template Sequence  LVMRKTVRLAKENDVQVGAHPGYPDLMGFGRRYMKLTPEEARNYILYQVGALYAFAKAEGLELQHVKPHGALYNAMVKEE
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   43......50.........60.........70.........80.........90.........100.........110.........120..
 
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Query Sequence  GYAHYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLKQSGYCGPY.
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Template Sequence  DLARAVIEGILDFDKDLILVTLSNSRVADIAEEMGLKVAHEVFADRAYNPDGTLVP. AVIEDKEEIAERVISMVKDGGIR
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   123......130.........140.........150.........160.........170........ .180.........190.........200.
 
   249250.........260.........270.........280
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Query Sequence  . . . . . . . . . . . . LIEMWSETAEDPAAEVAKARDWVKARMAKAGM
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Template Sequence  AINGEWVDLKVDTICVHGDNPK. . . . . AVEITSYIRKVLEEEGV
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   207..210.........220........ .230.........240.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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