Return to main results Retrieve Phyre Job Id

Job DescriptionP39305
Confidence22.70%DateThu Jan 5 11:59:09 GMT 2012
Rank439Aligned Residues84
% Identity13%Templated1v02a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Family 1 of glycosyl hydrolase
Resolution1.9

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40........ .50........ .60.........70.........80....... ..
Predicted Secondary structure 











...




...














.....
Query SS confidence 



























. . .









. . .




























. . . . .

Query Sequence  WLERLQLAKTLGFDFVEMSVDETDDRLS. . . RLNWSREQRL. . . ALVNAIVETGVRVPSMCLSAHRRFPLGSE. . . . . DD
Query Conservation    
 
  
   
   


          ...          ...         

 
            
   .....
 
Alig confidence 



























...









...




























.....

Template Conservation 
 


 
  


  





 



 
 
   
  
  

  
   
  
   

 




 


 
  
    


   
Template Sequence  YAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDE
Template Known Secondary structure  TT
S

STTSSSTT


TT
SS

B
GGGST
Template Predicted Secondary structure 

































Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   90.........100....
Predicted Secondary structure 
Query SS confidence 














Query Sequence  AVRAQGLEIMRKAIQ
Query Conservation    
          
 
Alig confidence 














Template Conservation    
  
  

  
  
Template Sequence  RIIKDYTDFAKVCFE
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 














   161........170.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions