Return to main results Retrieve Phyre Job Id

Job DescriptionP39305
Confidence80.79%DateThu Jan 5 11:59:09 GMT 2012
Rank134Aligned Residues52
% Identity6%Templated1ud2a2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.13

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40...... ...50.........60.........70..
Predicted Secondary structure 









......................









Query SS confidence 

























. . . . . . . . . . . . . . . . . . . . . .

























Query Sequence  WLERLQLAKTLGFDFVEMSVDETDDR. . . . . . . . . . . . . . . . . . . . . . LSRLNWSREQRLALVNAIVETGVRVP
Query Conservation    
 
  
   
   


        ......................                     

 
 
Alig confidence 

























......................

























Template Conservation 
  

 

  


 



 

         


  
 
          


  

  

  

  

  




Template Sequence  LHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINVY
Template Known Secondary structure  T




SSSTT

SSSTT
SS
S
BTTBSS
SS

TT
Template Predicted Secondary structure 











































Template SS confidence 









































































   25....30.........40.........50.........60.........70.........80.........90........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions