Return to main results Retrieve Phyre Job Id

Job DescriptionP39305
Confidence90.76%DateThu Jan 5 11:59:09 GMT 2012
Rank80Aligned Residues225
% Identity12%Templated1sr9a2
SCOP infoTIM beta/alpha-barrel Aldolase HMGL-like
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30. ........40..... ....50.........60.........
Predicted Secondary structure 




...








....................










Query SS confidence 


















. . .













. . . . . . . . . . . . . . . . . . . .























Query Sequence  KALPAGECWLERLQLAKTL. . . GFDFVEMSVDETDD. . . . . . . . . . . . . . . . . . . . RLSRLNWSREQRLALVNAIVETGV
Query Conservation         
  
 
  
   ...
   


       ....................                      

Alig confidence 


















...













....................























Template Conservation 
      
   
  
   
  


  



                                                  
Template Sequence  QALIDPXSPARKRRXFDLLVRXGYKEIEVGFPSASQTDFDFVREIIEQGAIPDDVTIQVLTQCRPELIERTFQACSGAPR
Template Known Secondary structure  T
SS


T
S
TTT
TT
S
TT
S
TT
S
Template Predicted Secondary structure 































Template SS confidence 















































































   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   70.........80.. .......90.........100.........110.........120.........130.........140......
Predicted Secondary structure 






...



















Query SS confidence 












. . .































































Query Sequence  RVPSMCLSAHRRF. . . PLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMAS
Query Conservation   
           ... 
   
   
          
  
  

   
                       
  
   
 
Alig confidence 












...































































Template Conservation    
      
                                                                 

   
Template Sequence  AIVHFYNSTSILQRRVVFRANRAEVQAIATDGARKCVEQAAKYPGTQWRFEYSPESYTGTELEYAKQVCDAVGEVIAPTP
Template Known Secondary structure 

TS


S
SSTGGGS


BT
Template Predicted Secondary structure 





















Template SS confidence 















































































   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   147..150.........160.........170......... 180.........190.........200.........210.........220...
Predicted Secondary structure 















...
















Query SS confidence 
































. . .











































Query Sequence  RAQVTLAMEIMDYPLMSSISKALGYAHYLNNPW. . . FQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFKNV
Query Conservation    

 
  
               
        ...  
  
  
                  
  


 
         
Alig confidence 














..















...






































.....
Template Conservation       
 
 

 
  .. 
  
  

  

  
     
 
  
 

  


 

 


  


  

 

 


.....
Template Sequence  ERPIIFNLPATVEXT. . TPNVYADSIEWXSRNLANRESVILSLHPHNDRGTAVAAAELGFAAGADRIEGCLFGNG. . . . .
Template Known Secondary structure  TB
SS

S..
SSSGGGB
TTS
TT

BGGG
S.....
Template Predicted Secondary structure 









..





















.....
Template SS confidence 















































































   244.....250........ .260.........270.........280.........290.........300.........310......
 
   224.....230.........240.....
Predicted Secondary structure 










Query SS confidence 





















Query Sequence  PFGEGVVDFERCFETLKQSGYC
Query Conservation    
 
 

    
  
   

 
Alig confidence  .




















Template Conservation  .   

   
 

  
   
  
Template Sequence  . ERTGNVCLVTLGLNLFSRGVD
Template Known Secondary structure  .STT
B
BTTT

Template Predicted Secondary structure  .










Template SS confidence 





















   317..320.........330.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions