Job Description P39305 Confidence 100.00% Date Thu Jan 5 11:59:09 GMT 2012 Rank 23 Aligned Residues 262 % Identity 12% Template d1qtwa_ SCOP info TIM beta/alpha-barrel Xylose isomerase-like Endonuclease IV Resolution 1.02

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	G	I	Y	E	K	A	L	P	A	G	E	C	W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	R	R	F	P	L	G	S
Query Conservation
Alig confidence										.	.	.																																		.
Template Conservation										.	.	.																																		.
Template Sequence		Y	I	G	A	H	V	S	A	.	.	.	A	G	G	L	A	N	A	A	I	R	A	A	E	I	D	A	T	A	F	A	L	F	T	K	N	Q	R	Q	W	R	A	A	P	.	L	T	T	Q	T	I	D	E	F	K	A	A	C	E	K	Y	H	Y	T	S	A	Q	I	L	P	H	D	S	Y	L	I	N	L	G	H
Template Known Secondary structure										.	.	.	T	T												T	T		S						S	S		S	S		S	S				.																T	T			G	G	G	B			B			T	T			T	T
Template Predicted Secondary structure										.	.	.																																		.
Template SS confidence
		3	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.
Predicted Secondary structure																																																																											.	.	.
Query SS confidence																																																																											.	.	.
Query Sequence		E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	V	T	L	A	M	E	I	M	D	Y	.	.	.	P	L	M	S
Query Conservation																																																																											.	.	.
Alig confidence																																																											.	.															.	.	.
Template Conservation																																																											.	.
Template Sequence		P	V	T	E	A	L	E	K	S	R	D	A	F	I	D	E	M	Q	R	C	E	Q	L	G	L	S	L	L	N	F	H	P	G	S	H	L	M	Q	I	S	E	E	D	C	L	A	R	I	A	E	S	I	N	I	A	L	D	.	.	K	T	Q	G	V	T	A	V	I	E	N	T	A	G	Q	G	S	N	L	G	F
Template Known Secondary structure		S	S																					T	T										B		T	T	T	S																			.	.			S	S												T	T	B			S
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.							.	.	.	.	.	200	.	.	.	.						.	.	.	.	.	210	.	.	.	.	.	.	.					.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure															.																			.	.	.	.	.	.											.	.	.	.	.														.	.	.	.
Query SS confidence															.																			.	.	.	.	.	.											.	.	.	.	.														.	.	.	.
Query Sequence		S	I	S	K	A	L	G	Y	A	H	Y	L	N	.	N	P	W	F	Q	L	Y	P	D	I	G	N	L	S	A	W	D	N	.	.	.	.	.	.	D	V	Q	M	E	L	Q	A	G	I	.	.	.	.	.	G	H	I	V	A	V	H	V	K	D	T	K	P	.	.	.	.	G	V	F	K	N	V	P	F	G	E
Query Conservation															.																			.	.	.	.	.	.											.	.	.	.	.														.	.	.	.
Alig confidence															.																			.	.	.	.	.	.											.	.	.	.	.														.	.	.	.
Template Conservation
Template Sequence		K	F	E	H	L	A	A	I	I	D	G	V	E	D	K	S	R	V	G	V	C	I	D	T	C	H	A	F	A	A	G	Y	D	L	R	T	P	A	E	C	E	K	T	F	A	D	F	A	R	T	V	G	F	K	Y	L	R	G	M	H	L	N	D	A	K	S	T	F	G	S	R	V	D	R	H	H	S	L	G	E
Template Known Secondary structure		S												S		G	G	G														T				S	S															T		G	G	G										S	S		T	T									T	T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		G	V	V	D	F	E	R	C	F	E	T	L	K	Q	S	G	Y	C	G	.	P	Y	L	I	E	M	W	S	E	T	A	E	D	P	A	A	E	V	A	K	A	R	D	W	V	K	A	R	M	A	K	A	G	M
Query Conservation																					.
Alig confidence																					.										.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.
Template Sequence		G	N	I	G	H	D	A	F	R	W	I	M	Q	D	D	R	F	D	G	I	P	L	I	L	E	T	I	N	P	.	.	.	.	.	.	D	I	W	A	E	E	I	A	W	L	K	A	Q	Q	T	E	K	A	V
Template Known Secondary structure		S	S	S		S								T		G	G	G	T	T	S							S		G	.	.	.	.	.	.	G	G												T	T	S	S
Template Predicted Secondary structure																															.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.							.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions