Return to main results Retrieve Phyre Job Id

Job DescriptionP39305
Confidence52.77%DateThu Jan 5 11:59:09 GMT 2012
Rank283Aligned Residues87
% Identity17%Templated1oy0a_
SCOP infoTIM beta/alpha-barrel Phosphoenolpyruvate/pyruvate domain Ketopantoate hydroxymethyltransferase PanB
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  IPLGIYEKALPAGECWLERLQLAKTLGFDFVEMSVDETDDRLSRLNWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLG
Query Conservation    


         
  
 
  
   
   


                             

 
            
 
Alig confidence 








..





















.............



























......
Template Conservation 





  
..   

 

 
   



 



.............


      
  
   



 






......
Template Sequence  LPFGSYEAG. . PTAALAAATRFLKDGGAHAVKL. . . . . . . . . . . . . EGGERVAEQIACLTAAGIPVMAHIGFTP. . . . . .
Template Known Secondary structure 

TTSSTT
..TT

S.............BSGGGT




......
Template Predicted Secondary structure 








..



.............













......
Template SS confidence 















































































   102.......110 .........120.........130.. .......140.........150.........160
 
   86...90.........100.........110.........120
Predicted Secondary structure 










Query SS confidence 


































Query Sequence  SEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYD
Query Conservation    
   
          
  
  

   
      
Alig confidence  .......



























Template Conservation  .......
  
   
  
 
 




  



 

Template Sequence  . . . . . . . GDAAEQTIADAIAVAEAGAFAVVMEMVP
Template Known Secondary structure  .......
T
SS

Template Predicted Secondary structure  .......







Template SS confidence 


































   175....180.........190.........200..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions