Job Description P39305 Confidence 60.64% Date Thu Jan 5 11:59:09 GMT 2012 Rank 251 Aligned Residues 116 % Identity 13% Template d1mxga2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.60

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																								.	.	.	.	50	.	.	.
Predicted Secondary structure																				.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	L	S	K	Q	I	P	L	G	I	Y	E	K	A	L	P	A	G	.	.	.	.	E	C	W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	S	R	L	N	W	S
Query Conservation																				.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	E	G	G	V	I	M	Q	A	F	Y	W	D	V	P	G	G	G	I	W	W	D	H	I	R	S	K	I	P	E	W	Y	E	A	G	I	S	A	I	W	L	P	P	P	S	K	G	M	S	G	G	Y	S	M	G	Y	D	P	Y	D	Y	F	D	L	G	E	Y	Y	Q	K	G	T	V	E	T	R	F	G	S
Template Known Secondary structure		G	G	G	T									T	T				S	S																	T										S			T	T	G	G	G			S	S	S				T	T		S	S		S		B	T	T	B	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.																																																		.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	L
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	E	L	V	R	L	I	Q	T	A	H	A	Y	G	I	K	V	I	A	D	V	V	I	N	H	R	A	G	G	D	L	E	W	N	P	F	V	G	D	Y	T	W	T	D	F	S	K	V	A	S	G	K	Y	T	A	N	Y	L	D	F	H	P	N	E	L	H	C	C	D	E	G	T	F	G	G	F	P	D	I
Template Known Secondary structure															T	T										S	B										T	T	T	T								T	T		T	T			S				G	G	G	B	S	S	S	S	S		S			S				T	T	S		B	B
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	H	H	K	E	W	D	Q	Y	W	L	W	K	S	N	E	S	Y	A	A	Y	L	R	S	I	G	F	D	G	W	R	F
Template Known Secondary structure			T	T	S								T	S	S	T	T	S								T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions