|   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
P | L | G | I | Y | E | K | A | L | P | A | G | E | C | W | L | E | R | L | Q | L | A | K | T | L | G | F | D | F | V | E | M | S | V | D | E | T | D | D | R | L | S | R | L | N | W | S | R | E | Q | R | L | A | L | V | N | A | I | V | E | T | G | V | R | V | P | S | M | C | L | S | A | H | R | R | F | P | L | G | S |
Query Conservation |   |
  |
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |
|   |   |   |
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|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
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| . | . | . | . |
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| . | . | . | . |
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|
Template Conservation |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |
Template Sequence |   |
K | L | C | F | N | E | A | T | T | L | E | N | S | N | L | K | L | D | L | E | L | C | E | K | H | G | Y | D | Y | I | E | I | R | T | X | D | K | L | P | E | Y | L | K | D | H | . |
. |
. |
. |
S | L | D | D | L | A | E | Y | F | Q | T | H | H | I | K | P | L | A | L | N | A | L | V | . |
. |
. |
. |
F | F | N | N |
Template Known Secondary structure |   |
 |  |  |  |  | G | G | G | G | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | T | T | T |  |  |  |  |  | T | T | S | S | . | . | . | . |
|  |  |  |  |  |  |  |  |  | T | S | S |
|  |  |  |  |  |  |  |  |  | . | . | . | . |
|
| S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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| . | . | . | . |
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Template SS confidence |   |
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  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
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. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
|
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70 | . | . | . |
  |
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | |
|
. | . | . | 160 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
| . | . |
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Query SS confidence |   |
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| . |
. |
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Query Sequence |   |
E | D | D | A | V | R | A | Q | G | L | E | I | M | R | K | A | I | Q | F | A | Q | D | V | G | I | R | V | I | Q | L | A | G | Y | D | V | Y | Y | Q | E | A | N | N | E | T | R | R | R | F | R | D | G | L | K | E | S | V | E | M | A | S | R | A | Q | V | T | L | A | M | E | I | . |
. |
M | D | Y | P | L | M | S | S |
Query Conservation |   |
  |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |   |
|   | . | . |   |   |   |   |   |   |   |   |
Alig confidence |   |
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| . | . |
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|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | D | E | K | G | H | N | E | I | I | T | E | F | K | G | X | X | E | T | C | K | T | L | G | V | K | Y | V | V | A | V | P | L | V | T | E | Q | K | I | V | K | E | E | I | K | K | S | S | V | D | V | L | T | E | L | S | D | I | A | E | P | Y | G | V | K | I | A | L | E | F | V | G | H | P | Q | C | T | V | N | T |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
|
| B |
| S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | T |
|  |  |  |  |  |
|
|
|
| T | T | B | S | S |
| S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
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|
Template SS confidence |   |
|
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  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
  |
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | |
|
|
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|
|
. | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |
|  |  |  |  |  |  |
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|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
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|
| . | . | . | . | . | . |
|
|
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|  |  |  |
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|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
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| . |
. |
. |
. |
. |
. |
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|
Query Sequence |   |
I | S | K | A | L | G | Y | A | H | Y | L | N | N | P | W | F | Q | L | Y | P | D | I | G | N | L | S | A | W | D | N | D | V | Q | M | E | L | Q | A | G | I | G | H | I | V | A | V | H | V | K | D | T | K | P | . |
. |
. |
. |
. |
. |
G | V | F | K | N | V | P | F | G | E | G | V | V | D | F | E | R | C | F | E | T |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |
|   |   |
Alig confidence |   |
|
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| . | . | . | . | . | . |
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|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |
|   |   |   |
Template Sequence |   |
F | E | Q | A | Y | E | I | V | N | T | V | N | R | D | N | V | G | L | V | L | D | S | F | H | F | H | A | X | G | S | N | I | E | S | L | K | Q | A | D | G | K | K | I | F | I | Y | H | I | D | D | T | E | D | F | P | I | G | F | L | T | D | E | D | R | V | W | P | G | Q | G | A | I | D | L | D | A | H | L | S | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  | T | S |
| G | G | G |  |  |  |  |  |  |
|  |  |
|
|
|
| T | T | T |
|
| G | G | G |  |  | S | T | T | S | S | S | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|  |  |  |  |  |
|
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |  |
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|  |  |  |  |  |  |  |
Template SS confidence |   |
|
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|
  |   |
154 | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . |
  |
  |   |
239 | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | |
|
. | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
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|
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|
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|
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|
|
|
|
| . |
. |
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|
Query Sequence |   |
L | K | Q | S | G | Y | C | G | P | Y | L | I | E | M | W | S | E | T | . |
. |
A | E | D | P | A | A | E | V | A | K | A | R | D | W | V | K | A | R | M | A | K |
Query Conservation |   |
|   |   |   |
|
|   |
|   |
|   |   |
|   |   |   |   |   | . | . |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
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|
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|
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|
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|
|
| . | . |
|
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|
Template Conservation |   |
|   |   |   |
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
Template Sequence |   |
L | K | E | I | G | F | S | D | V | V | S | V | E | L | F | R | P | E | Y | Y | K | L | T | A | E | E | A | I | Q | T | A | K | K | T | T | V | D | V | V | S | K |
Template Known Secondary structure |   |
 |  |  | T | T |
|
| S |  |  |  |  |
|
|
|
| G | G | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
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234 | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . |
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