Job Description P39305 Confidence 44.09% Date Thu Jan 5 11:59:09 GMT 2012 Rank 306 Aligned Residues 193 % Identity 16% Template d1i4na_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.50

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	A	G	E	C	W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	R	R	F	P	L	G	S	E	D	D	A	V	R	A	Q
Query Conservation
Alig confidence																.															.	.	.	.	.																.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.															.	.	.	.	.																.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	N	A	D	A	S	L	E	D	F	I	R	M	Y	.	D	E	L	A	D	A	I	S	I	L	T	E	K	H	.	.	.	.	.	Y	F	K	G	D	P	A	F	V	R	A	A	R	N	L	.	.	.	T	C	R	P	I	L	A	K	D	F	Y	I	D	T	V	Q	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S		T	T											.					S									S	.	.	.	.	.	S	S				T								T	T	.	.	.			S										S	T			.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.															.	.	.	.	.																.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.						.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	V	T	L	A	M	E	I	M	D	Y	P	L	M	S	S	I	S	K	A	L	G	Y	A	H	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	V	K	L	A	S	S	V	G	A	D	A	I	L	I	I	A	R	I	L	T	.	.	.	.	.	.	.	.	.	.	.	.	A	E	Q	I	K	E	I	Y	E	A	A	E	E	L	G	M	D	S	L	V	E	V	H	.	.	.	.	.	.	S	R	E	D	L	E	K	V	F	S	V
Template Known Secondary structure		.	.	.	.	.	.	.	.							T	T		S						G	G	G	S		.	.	.	.	.	.	.	.	.	.	.	.													T	T	T									.	.	.	.	.	.	S									T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Template SS confidence
										117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.													.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.							160	.	.	.	.	.	.	.	.	.	170
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	N	P	W	F	Q	L	Y	P	D	I	G	N	L	S	A	W	D	N	D	V	Q	M	E	L	Q	A	G	I	G	H	I	V	A	V	H	V	K	D	T	K	P	G	V	F	K	N	V	P	F	G	E	G	V	V	D	F	E	R	C	F	E	T	L	K	Q	S	G	Y	C	G	P	Y	L	I	E	M	W	S
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.														.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.														.
Template Sequence		I	R	P	K	I	I	G	I	N	T	R	D	L	D	T	F	E	I	K	K	N	V	L	W	E	L	L	P	L	V	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	V	V	V	A	E	S	G	I	K	D	P	R	E	L	K	D	L	.	R	G	K	V	N	A	V	L	V	G	T	S	I	.
Template Known Secondary structure					S							B		T	T	T			B		T	T						G	G	G	S		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S						S					G	G	G					.	T	T	T		S									.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.														.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.															.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	A	E	D	P	A	A	E	V	A	K	A	R	D	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	K	A	E	N	P	R	R	F	L	E	E	M	R	A	W
Template Known Secondary structure					S	S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions