Return to main results Retrieve Phyre Job Id

Job DescriptionP39305
Confidence32.90%DateThu Jan 5 11:59:09 GMT 2012
Rank357Aligned Residues84
% Identity17%Templated1gnxa_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Family 1 of glycosyl hydrolase
Resolution1.68

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40........ .50........ .60.........70.........80.... .....90..
Predicted Secondary structure 











.




...











....



Query SS confidence 



























.









. . .

























. . . .







Query Sequence  WLERLQLAKTLGFDFVEMSVDETDDRLS. RLNWSREQRL. . . ALVNAIVETGVRVPSMCLSAHRRFPL. . . . GSEDDAVR
Query Conservation    
 
  
   
   


          .          ...         

 
            
....   
   
Alig confidence 



























.









...

























....







Template Conservation 
 


 
   

    



 



 
 
 
  
      
   
  
   

 




 


 
  
   


      
Template Sequence  WREDVALMAELGLGAYRFSLAWPRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHWDLPQELENAGGWPERATA
Template Known Secondary structure  TT
S

SGGGSSS

TT
SS

BTT
TTST
Template Predicted Secondary structure 
































Template SS confidence 















































































   73......80.........90.........100.........110.........120.........130.........140.........150..
 
   93......100....
Predicted Secondary structure 
Query SS confidence 











Query Sequence  AQGLEIMRKAIQ
Query Conservation            
 
Alig confidence 











Template Conservation    
  

     
Template Sequence  ERFAEYAAIAAD
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 











   153......160....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions