Return to main results Retrieve Phyre Job Id

Job DescriptionP39305
Confidence91.33%DateThu Jan 5 11:59:09 GMT 2012
Rank77Aligned Residues128
% Identity13%Templated1f3ta2
SCOP infoTIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50.........60.........70.........80.........90.........
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  CWLERLQLAKTLGFDFVEMSVDETDDRLSRLNWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIM
Query Conservation 
  
 
  
   
   


                             

 
            
   
   
       
Alig confidence 





















.....




































....











Template Conservation 
  

  
        
 


 ..... 




                
   


 
 

   ....
           
Template Sequence  CVDELEKVAKTHPKAKMVLRIS. . . . . TVKFGAKVEDCRFILEQAKKLNIDVTGVSFHVGSGST. . . . DASTFAQAISDS
Template Known Secondary structure  S
TT
B
.....


S
B
TT




S

S....
T
Template Predicted Secondary structure 




.....















....
Template SS confidence 















































































   135....140.........150...... ...160.........170.........180.........190... ......200.....
 
   100.........110.. .......120.........130.........140......... 150......
Predicted Secondary structure 



.










..


Query SS confidence 












.




































. .






Query Sequence  RKAIQFAQDVGIR. VIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQ. . VTLAMEI
Query Conservation     
  
  

  . 
                       
  
   
   
..
 
  
 
Alig confidence 












.




































..






Template Conservation            
  
  





                 
               
  

Template Sequence  RFVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDLKLTIVAEP
Template Known Secondary structure  TT









SSTTSSS
S


TT


Template Predicted Secondary structure 

























Template SS confidence 



























































   216...220.........230.........240.........250.........260.........270.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions