Job Description P39305 Confidence 98.82% Date Thu Jan 5 11:59:09 GMT 2012 Rank 42 Aligned Residues 234 % Identity 15% Template d1d8wa_ SCOP info TIM beta/alpha-barrel Xylose isomerase-like L-rhamnose isomerase Resolution 1.60

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.							80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.					.	.	.	.	110	.
Predicted Secondary structure																																								.	.	.	.	.	.																											.	.	.	.
Query SS confidence																																								.	.	.	.	.	.																											.	.	.	.
Query Sequence		E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	.	.	.	.	.	.	R	R	F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	.	.	.	.	A	Q	D	V	G	I
Query Conservation																																								.	.	.	.	.	.																											.	.	.	.
Alig confidence																																	.							.	.	.	.	.	.																											.	.	.	.
Template Conservation																																	.
Template Sequence		E	S	D	T	P	V	S	R	D	Q	I	K	P	E	H	F	K	N	W	V	E	W	A	K	A	N	Q	L	G	L	D	.	F	N	P	S	C	F	S	H	P	L	S	A	D	G	F	T	L	S	H	A	D	D	S	I	R	Q	F	W	I	D	H	C	K	A	S	R	R	V	S	A	Y	F	G	E	Q	L	G	T
Template Known Secondary structure				S	S				G	G	G			G	G	G	G										T	T					.						S	S	S	G	G	G	T	T	S		S	T	T		S	S																										T	S
Template Predicted Secondary structure																																	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		112	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.							.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure						.	.	.																																						.				.	.	.	.	.	.
Query SS confidence						.	.	.																																						.				.	.	.	.	.	.
Query Sequence		R	V	I	Q	.	.	.	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	V	T	L	.	A	M	E	.	.	.	.	.	.	I	M	D	Y	P	L	M	S	S	I	S	K	A	L	G	Y	A	H	Y	L	N	N	P	W	F	Q
Query Conservation						.	.	.																																						.				.	.	.	.	.	.
Alig confidence						.	.	.																																						.				.	.	.	.	.	.																					.	.	.
Template Conservation																																																																												.	.	.
Template Sequence		P	S	V	X	N	I	W	I	P	D	G	X	K	D	I	T	V	D	R	L	A	P	R	Q	R	L	L	A	A	L	D	E	V	I	S	E	K	L	N	P	A	H	H	I	D	A	V	E	S	K	L	F	G	I	G	A	E	S	Y	T	V	G	S	N	E	F	Y	X	G	Y	A	T	S	R	.	.	.	Q	T	A
Template Known Secondary structure														S	S			S		S															T		S				T	T	T									S		B	T	T	B		S			S	S													.	.	.	T
Template Predicted Secondary structure																																																																												.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260				.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.
Predicted Secondary structure																									.	.																																																	.
Query SS confidence																									.	.																																																	.
Query Sequence		L	Y	P	D	I	G	N	L	S	A	W	D	N	D	V	Q	M	E	L	Q	A	G	I	.	.	G	H	I	V	A	V	H	V	K	D	T	K	P	G	V	F	K	N	V	P	F	G	E	G	V	V	D	F	E	R	C	F	E	T	L	K	Q	S	G	Y	C	G	P	Y	L	I	E	M	.	W	S	E	T	A	E
Query Conservation																									.	.																																																	.
Alig confidence																									.	.				.																							.	.																					.
Template Conservation																														.																							.	.
Template Sequence		L	C	L	D	A	G	H	F	H	P	T	E	V	I	S	D	K	I	S	A	A	X	L	Y	V	P	Q	L	.	L	L	H	V	S	R	P	V	R	W	D	S	D	H	V	V	L	L	D	D	E	T	.	.	Q	A	I	A	S	E	I	V	R	H	D	L	F	D	R	V	H	I	G	L	D	F	F	D	A	S	I
Template Known Secondary structure						T	T	S	S		T	T											T	T	T	S	S			.						B		S	S	S	S			B				S	S				.	.										T	T	G	G	G	T											S	S
Template Predicted Secondary structure																														.																							.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.			.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	A	A	E	V	A	K	A	R	D	W	V	K	A	R	M	A	K	A	G	M	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R	I	A	A	W	V	I	G	T	R	N	X	K	K	A	L	L	R	A	L	L	E	P
Template Known Secondary structure																							T	S
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions