Job Description P39305 Confidence 99.80% Date Thu Jan 5 11:59:09 GMT 2012 Rank 37 Aligned Residues 272 % Identity 14% Template d1a0ea_ SCOP info TIM beta/alpha-barrel Xylose isomerase-like Xylose isomerase Resolution 2.70

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.											.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.					.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Query Sequence		P	L	G	I	Y	E	K	A	L	P	A	G	E	C	W	.	.	.	.	.	.	.	.	.	.	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	.	.	.	.	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P
Query Conservation																	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Template Conservation
Template Sequence		P	F	G	D	P	T	A	D	R	P	W	N	R	Y	T	D	P	M	D	K	A	F	A	R	V	D	A	L	F	E	F	C	E	K	L	N	I	E	Y	F	C	F	H	D	R	D	I	A	P	E	G	K	T	L	R	E	T	N	K	I	L	D	K	V	V	E	R	I	K	E	R	M	K	D	S	N	V	K	L	L
Template Known Secondary structure		T	T	B							G	G	G	S			S																				T												S				S	S																						S	S
Template Predicted Secondary structure
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		73	.	.	.	.	.	.						80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure									.	.	.	.	.																																														.	.	.	.
Query SS confidence									.	.	.	.	.																																														.	.	.	.
Query Sequence		S	M	C	L	S	A	H	.	.	.	.	.	R	R	F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	.	.	.	.	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E
Query Conservation									.	.	.	.	.																																														.	.	.	.
Alig confidence									.	.	.	.	.																																														.	.	.	.
Template Conservation
Template Sequence		W	G	T	A	N	L	F	S	H	P	R	Y	M	H	G	A	A	T	T	C	S	A	D	V	F	A	Y	A	A	A	Q	V	K	K	A	L	E	I	T	K	E	L	G	G	E	G	Y	V	F	W	G	G	R	E	G	Y	E	T	L	L	N	T	D	L	G	F	E	L	E	N	L	A	R	F	L	R	M	A	V	D
Template Known Secondary structure								S	S	S	G	G	G	T	T		S	T	T		S																						T	T		S							T	T	S			S		S	T	T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.								.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.																										.																										.	.
Query SS confidence													.	.	.	.	.	.	.																										.																										.	.
Query Sequence		M	A	S	R	A	Q	V	T	L	A	M	.	.	.	.	.	.	.	E	I	M	D	Y	P	L	M	S	S	I	S	K	A	L	G	Y	A	H	Y	L	N	N	P	W	.	F	Q	L	Y	P	D	I	G	N	L	S	A	W	D	N	D	V	Q	M	E	L	Q	A	G	I	.	.	G	H	I	V	A	V	H	V	K
Query Conservation													.	.	.	.	.	.	.																										.																										.	.
Alig confidence													.	.	.	.	.	.	.																										.																										.	.
Template Conservation
Template Sequence		Y	A	K	R	I	G	F	T	G	Q	F	L	I	E	P	K	P	K	E	P	T	K	H	Q	Y	D	F	D	V	A	T	A	Y	A	F	L	K	S	H	G	L	D	E	Y	F	K	F	N	I	E	A	N	H	A	T	L	A	G	H	T	F	Q	H	E	L	R	M	A	R	I	L	G	K	L	G	S	I	D	A	N
Template Known Secondary structure						T	T			S								S		S	S	S	S			S	S		S												T		G	G	G													T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
				214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.					.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																	.								.	.	.	.
Query SS confidence		.	.																																	.								.	.	.	.
Query Sequence		.	.	D	T	K	P	G	V	F	K	N	V	P	F	G	E	G	V	V	D	F	E	R	C	F	E	T	L	K	Q	S	G	Y	C	.	G	P	Y	L	I	E	M	.	.	.	.	W	S	E	T	A	E	D	P	A	A	E	V	A	K	A	R	D	W	V	K	A	R	M	A	K	A
Query Conservation		.	.																																	.								.	.	.	.
Alig confidence		.	.																																	.								.	.	.	.
Template Conservation
Template Sequence		Q	G	D	L	L	L	G	W	D	T	D	Q	F	P	T	N	V	Y	D	T	T	L	A	M	Y	E	V	I	K	A	G	G	F	T	K	G	G	L	N	F	D	A	K	V	R	R	A	S	Y	K	V	E	D	L	F	I	G	H	I	A	G	M	D	T	F	A	L	G	F	K	V	A
Template Known Secondary structure		B			T	T	S	S	S				B																			T	S		S	S											T	T			S
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions