Job Description P39305 Confidence 64.76% Date Thu Jan 5 11:59:09 GMT 2012 Rank 223 Aligned Residues 200 % Identity 12% Template c3u9sE_ PDB info PDB header:ligase Chain: E: PDB Molecule:methylcrotonyl-coa carboxylase, alpha-subunit; PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc) 750 kd holoenzyme, coa complex Resolution 3.50 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	C	W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	R	R	F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	G	D	R	I	I	A	A	A	L	A	S	G	A	Q	A	I	H	P	G	Y	G	F	L	S	E	N	A	.	.	.	.	.	.	.	.	.	.	.	D	F	A	R	A	C	E	E	A	G	L	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	P	P	A	A	A	I	D	A	M	G	S	K
Template Known Secondary structure		T												T	T								S	S	T	T	S	S		T	.	.	.	.	.	.	.	.	.	.	.								T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S								T	T	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.												.	.	.	140	.	.	.	.	.	.	.	.	.														150	.	.	.	.	.	.	.	.	.	160	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	V	T	L	A	M	E	I	M	D	Y	P	L	M	S	S	I	S	K	A	L	G	Y	A	H	Y	L	N	N	P
Query Conservation
Alig confidence					.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	A	.	K	A	L	M	E	E	A	G	V	P	L	V	P	G	Y	H	G	E	A	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	T	F	R	R	E	A	G	R	I	G	Y	P	V	L	L	K	A	A	A	M	K	V	V	E	R	E	A	E	L	A	E	A	L	S	S	A	Q	R	A
Template Known Secondary structure					.						T	T	T									S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								T	T		S														S	S	G	G	G	T					S
Template Predicted Secondary structure					.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.															.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.				.	230	.								.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.				.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.				.	.	.	.	.	.	.
Query Sequence		W	F	Q	L	Y	P	D	I	G	N	L	S	A	W	D	N	D	V	Q	M	E	L	Q	A	G	I	G	H	I	V	A	V	H	V	K	D	T	K	P	G	V	F	K	N	V	P	F	G	E	G	.	.	.	V	V	D	.	.	.	.	.	.	.	F	E	R	C	F	E	T	L	K	Q	S	G	Y	C	G	P	Y
Query Conservation																																																				.	.	.				.	.	.	.	.	.	.
Alig confidence								.	.	.																																										.	.	.				.	.	.	.	.	.	.
Template Conservation								.	.	.
Template Sequence		R	M	L	V	E	K	.	.	.	Y	L	L	K	P	R	H	V	E	I	Q	V	F	A	D	R	H	G	H	C	L	Y	L	N	E	R	D	C	S	I	Q	R	R	H	Q	K	V	V	E	E	A	P	A	P	G	L	G	A	E	L	R	R	A	M	G	E	A	A	V	R	A	A	Q	A	I	G	Y	V	G	A	G
Template Known Secondary structure								.	.	.			S	S		B										T	T	S													B	S	S	S	S	B						S		S	S																				T	T			S
Template Predicted Secondary structure								.	.	.
Template SS confidence
		243	.	.	.	.	.				.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	E	M	W	S	E	T	A	E	D	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	E	F	L	L	D	E	R	G	Q	F
Template Known Secondary structure							B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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