Job Description P39305 Confidence 91.99% Date Thu Jan 5 11:59:09 GMT 2012 Rank 72 Aligned Residues 129 % Identity 16% Template c3thdD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:beta-galactosidase; PDBTitle: crystal structure of human beta-galactosidase in complex with 1-2 deoxygalactonojirimycin Resolution 1.79 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.																	.	.	.	.	.	.	80	.
Predicted Secondary structure																																						.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	.	.	.	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	C	L	S	A	H	R	R
Query Conservation																																						.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	K	D	R	L	L	K	M	K	M	A	G	L	N	A	I	Q	T	Y	V	P	W	N	F	H	E	P	W	P	G	Q	Y	Q	F	S	E	D	H	D	V	E	Y	F	L	R	L	A	H	E	L	G	L	L	V	I	L	R	P	G	P	Y	I	C	A	E	W	E	M	G	G	L	P	A	W	L	L	E	K	E	S
Template Known Secondary structure												T	T		S													S	B	T	T	B				S	G	G	G												T	T									S				T	T	B	G	G	G	G			G	G	G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.
Predicted Secondary structure																														.	.	.	.																																								.
Query SS confidence																														.	.	.	.																																								.
Query Sequence		F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	.	.	.	.	G	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	.	Q	V	T	L	A	M
Query Conservation																														.	.	.	.																																								.
Alig confidence																														.	.	.	.																					.	.	.	.	.															.
Template Conservation																																																						.	.	.	.	.
Template Sequence		I	L	L	R	S	S	D	P	D	Y	L	A	A	V	D	K	W	L	G	V	L	L	P	K	M	K	P	L	L	Y	Q	N	G	G	P	V	I	T	V	Q	V	E	N	E	Y	G	S	Y	F	A	C	D	.	.	.	.	.	F	D	Y	L	R	F	L	Q	K	R	F	R	H	H	L	G	D	D	V	V	L
Template Known Secondary structure				S	S	S																					G	G	G	B	G	G	G	T	S	S							S	S		G	G	G	S	S				.	.	.	.	.																	S	S	S
Template Predicted Secondary structure																																																						.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.						.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions