Job Description P39305 Confidence 100.00% Date Thu Jan 5 11:59:09 GMT 2012 Rank 14 Aligned Residues 273 % Identity 16% Template c3qxbB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:putative xylose isomerase; PDBTitle: crystal structure of a putative xylose isomerase (yp_426450.1) from2 rhodospirillum rubrum atcc 11170 at 1.90 a resolution Resolution 1.90 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80
Predicted Secondary structure																							.	.																																																						.	.
Query SS confidence																							.	.																																																						.	.
Query Sequence		Q	I	P	L	G	I	Y	E	K	A	L	P	A	G	E	C	W	L	E	R	L	.	.	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	.	.	H	R
Query Conservation																							.	.																																																						.	.
Alig confidence																							.	.																							.																															.	.
Template Conservation																																															.
Template Sequence		G	X	K	L	G	V	N	L	C	F	A	V	K	R	W	L	E	P	D	R	L	A	G	L	V	R	D	D	L	G	L	E	Y	V	Q	Y	T	Y	D	L	T	D	P	W	W	.	P	D	I	E	R	D	R	R	A	I	A	Y	A	K	A	F	R	K	A	G	L	T	I	E	S	T	F	G	G	L	A	S	Y	T
Template Known Secondary structure									G	G	G	G	T	T	T	S		S											T	T									T	T	T	S		T	T	S	.																			T	T														T
Template Predicted Secondary structure																																															.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.
Query SS confidence																																														.	.	.	.	.
Query Sequence		R	F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	.	.	.	.	.	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	V	T	L	A	M	E
Query Conservation																																														.	.	.	.	.
Alig confidence																																														.	.	.	.	.
Template Conservation
Template Sequence		Y	N	H	F	L	A	P	T	L	E	L	Q	S	L	G	Y	Q	H	L	K	R	A	I	D	X	T	A	A	X	E	V	P	A	T	G	X	P	F	G	S	Y	S	A	A	D	A	L	N	P	A	R	R	E	E	I	Y	A	I	A	R	D	X	W	I	E	L	A	A	Y	A	K	R	Q	G	L	S	X	L	Y	V
Template Known Secondary structure		S		B	T	T		S	S																					T	T		S							B	B							T																											T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		156							.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.						190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.																																		.	.	.	.	.
Query SS confidence			.	.	.	.	.	.																																		.	.	.	.	.
Query Sequence		I	.	.	.	.	.	.	M	D	Y	P	L	M	S	S	I	S	K	A	L	G	Y	A	H	Y	L	N	N	P	W	F	Q	L	Y	P	D	I	G	N	L	.	.	.	.	.	S	A	W	D	N	D	V	Q	M	E	L	Q	A	G	I	G	H	I	V	A	V	H	V	K	D	T	K	P	G	V	F	K	N	V	P
Query Conservation			.	.	.	.	.	.																																		.	.	.	.	.
Alig confidence			.	.	.	.	.	.																																		.	.	.	.	.
Template Conservation
Template Sequence		E	P	V	P	L	A	T	E	F	P	S	S	A	A	D	A	A	R	L	X	A	D	L	D	G	R	T	E	I	P	V	R	L	L	V	D	W	G	H	A	L	F	E	P	L	F	G	P	E	A	D	X	D	H	W	X	D	L	C	Q	P	W	I	A	A	Y	H	I	Q	Q	T	D	G	Q	L	D	R	H	W	S
Template Known Secondary structure					S		T	T	B	S	S		S												T	T	T	S	S	S												T						G	G	G		S									G	G	G								B			S	S	S				B
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		225		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure			.																							.
Query SS confidence			.																							.
Query Sequence		F	.	G	E	G	V	V	D	F	E	R	C	F	E	T	L	K	Q	S	G	Y	C	G	P	.	Y	L	I	E	M	W	S	E	T	A	E	D	P	A	A	E	V	A	K	A	R	D	W	V	K	A	R	M	A	K	A
Query Conservation			.																							.
Alig confidence			.																							.
Template Conservation
Template Sequence		F	T	Q	P	G	V	V	T	P	Q	R	L	Q	D	F	W	D	K	Y	A	L	T	D	Q	T	F	F	A	E	I	L	Y	P	F	E	A	R	D	E	D	V	L	A	D	X	I	A	S	V	K	A	L	K	A	A	S
Template Known Secondary structure		T	T	S		S	S													T	T		S	S											T	T	S																		T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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