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Job DescriptionP39305
Confidence21.80%DateThu Jan 5 11:59:09 GMT 2012
Rank444Aligned Residues188
% Identity15%Templatec3qjaA_
PDB info PDB header:lyaseChain: A: PDB Molecule:indole-3-glycerol phosphate synthase; PDBTitle: crystal structure of the mycobacterium tuberculosis indole-3-glycerol2 phosphate synthase (trpc) in apo form
Resolution1.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50.........60.........70.........80.........90.........
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Query Sequence  CWLERLQLAKTLGFDFVEMSVDETDDRLSRLNWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIM
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Template Sequence  DPAKLAQAYQDGGARIVSV. . . . . . . . VTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQ. . . . . . . . . . . . . . . . . . . .
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TT
S........

GGG
SS
S


S....................
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   73......80.........90. ........100.........110.........120....
 
   100.........110.........120.........130.........140.........150.........160.........170.........
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Query Sequence  RKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMSSISKALGYAHYLNNPW
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Template Sequence  PYQIHEARAHGADMLLLIVAALEQ. . . . . . . . . . . . SVLVSMLDRTESLGMTALVEVH. . . . . . TEQEADRALK. AGAKV
Template Known Secondary structure  TT
SGGGS
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S......S.T
S
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   125....130.........140........ .150.........160.........170 .........180 .....
 
   180.........190.........200.........210.........220.........230.........240.........250.........
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Query Sequence  FQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLKQSGYCGPYLIEMWSETAED
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Template Sequence  IGVNARDLMTLDVDRDCFARIAPGLPS. . . . . . . . . . . . . . SVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTSG. D
Template Known Secondary structure  SB
TTT

B
TTGGGS
T..............TSS


STT
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   186...190.........200.........210.. .......220.........230.........240......... 250
 
   260.........
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Query Sequence  PAAEVAKARD
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Template Sequence  PRAAVADLVT
Template Known Secondary structure  T
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   251........260
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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