Job Description P39305 Confidence 98.62% Date Thu Jan 5 11:59:09 GMT 2012 Rank 43 Aligned Residues 225 % Identity 12% Template c3p14C_ PDB info PDB header:isomerase Chain: C: PDB Molecule:l-rhamnose isomerase; PDBTitle: crystal structure of l-rhamnose isomerase with a novel high thermo-2 stability from bacillus halodurans Resolution 2.51 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.							80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.					.	.	.	.	110	.	.	.	.	.				.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.																											.	.	.	.											.	.	.
Query SS confidence																													.	.	.	.	.	.																											.	.	.	.											.	.	.
Query Sequence		S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	.	.	.	.	.	.	R	R	F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	.	.	.	.	A	Q	D	V	G	I	R	V	I	Q	.	.	.	L	A	G	Y
Query Conservation																													.	.	.	.	.	.																											.	.	.	.											.	.	.
Alig confidence																						.							.	.	.	.	.	.																											.	.	.	.											.	.	.
Template Conservation																						.
Template Sequence		E	P	R	H	F	E	K	W	V	R	W	A	K	R	H	G	L	G	L	D	.	F	N	P	T	L	F	S	H	E	K	A	K	D	G	L	T	L	A	H	P	D	Q	A	I	R	Q	F	W	I	D	H	C	I	A	S	R	K	I	G	E	Y	F	G	K	E	L	E	T	P	C	L	T	N	I	W	I	P	D	G
Template Known Secondary structure			G	G	G	G											T					.						S	S	S	G	G	G	T	T	S		S	T	T		S	S																										T	S
Template Predicted Secondary structure																						.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																									.														.	.	.
Query SS confidence																									.														.	.	.
Query Sequence		D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	.	E	M	A	S	R	A	Q	V	T	L	A	M	E	.	.	.	I	M	D	Y	P	L	M	S	S	I	S	K	A	L	G	Y	A	H	Y	L	N	N	P	W	F	Q	L	Y	P	D	I	G	N	L	S	A	W	D	N	D
Query Conservation																									.														.	.	.
Alig confidence																									.														.	.	.
Template Conservation
Template Sequence		Y	K	D	T	P	S	D	R	L	T	P	R	K	R	L	K	E	S	L	D	Q	I	F	A	A	E	I	N	E	A	Y	N	L	D	A	V	E	S	K	L	F	G	I	G	S	E	S	Y	V	V	G	S	H	E	F	Y	L	S	Y	A	L	K	N	D	K	L	C	L	L	D	T	G	H	Y	H	P	T	E	T	V
Template Known Secondary structure			S	S			S		S															T		S				T	T	T									S		B	T	T	B		S			S	S												T	T							T	T	S	S		T	T			S
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
				196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure		.	.																																																										.
Query SS confidence		.	.																																																										.
Query Sequence		.	.	V	Q	M	E	L	Q	A	G	I	G	H	I	V	A	V	H	V	K	D	T	K	P	G	V	F	K	N	V	P	F	G	E	G	V	V	D	F	E	R	C	F	E	T	L	K	Q	S	G	Y	C	G	P	Y	L	I	E	M	.	W	S	E	T	A	E	D	P	A	A	E	V	A	K	A	R	D	W	V	K
Query Conservation		.	.																																																										.
Alig confidence		.	.													.																	.	.																											.
Template Conservation																.																	.	.
Template Sequence		S	N	K	I	S	A	M	L	L	F	H	D	K	L	.	A	L	H	V	S	R	P	V	R	W	D	S	D	H	V	V	.	.	T	F	D	D	E	L	R	E	I	A	L	E	I	V	R	N	D	A	L	D	R	V	L	I	G	L	D	F	F	D	A	S	I	N	R	I	A	A	W	T	I	G	T	R	N	V	I
Template Known Secondary structure													S			.						B		S	S	S				B			.	.		S														T	T		T	T	T										T	T	S
Template Predicted Secondary structure																.																	.	.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.			.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		273	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	M	A	K	A	G	M	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	L	L	F	A	M	L	I
Template Known Secondary structure									T	S
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions