Job Description P39305 Confidence 25.70% Date Thu Jan 5 11:59:09 GMT 2012 Rank 412 Aligned Residues 187 % Identity 10% Template c3na8A_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of a putative dihydrodipicolinate synthetase from2 pseudomonas aeruginosa Resolution 1.85 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	R	R	F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A
Query Conservation
Alig confidence																																																			.	.	.	.	.	.																	.
Template Conservation																																																			.	.	.	.	.	.																	.
Template Sequence		I	I	G	Y	T	I	T	P	F	A	A	D	G	G	L	D	L	P	A	L	G	R	S	I	E	R	L	I	D	G	G	V	H	A	I	A	P	L	G	S	T	G	E	G	A	Y	L	S	D	.	.	.	.	.	.	P	E	W	D	E	V	V	D	F	T	L	K	T	V	A	H	.	R	V	P	T	I	V	S	V
Template Known Secondary structure										B		T	T	S	S	B															T	T		S					S	S	G	G	G	T	G	G	G	S			.	.	.	.	.	.															T	T	.	S	S		B
Template Predicted Secondary structure																																																			.	.	.	.	.	.																	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.							.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	V	T	L	A	M	E	I	M	D	Y	P	L	M	S	S	I	S	K	A	L	G	Y	A	H	Y	L	N	N	.	.	P	W	F	Q	L	Y	P	D	I	G	N	L	S	A	W	D	N	D
Query Conservation																																																														.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	A	K	T	V	R	R	A	Q	F	A	E	S	L	G	A	E	A	V	X	V	L	P	I	S	Y	W	K	L	N	E	A	E	V	F	Q	H	Y	R	A	V	G	E	A	I	G	V	P	V	X	L	Y	N	N	P	G	T	S	G	I	D	X	S
Template Known Secondary structure				S	.	.	.	.	.	.	.	.	.	.	.	.	.	S														T	T		S									S	S																			S	S												S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		101	.	.														.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.												.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	M	E	L	Q	A	G	I	G	H	I	V	A	V	H	V	K	D	T	K	P	.	.	.	.	.	.	.	.	.	.	.	G	V	F	K	N	V	P	F	G	E	G	V	V	D	F	E	R	C	F	E	T	L	K	Q	S	G	Y	C	G	P	Y	L
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.														.	.	.	.							.
Template Conservation																																																.	.	.	.							.
Template Sequence		V	E	L	I	L	R	I	V	R	E	V	D	N	V	T	X	V	K	E	S	T	G	D	I	Q	R	X	H	K	L	R	L	L	G	E	G	R	V	P	F	Y	N	G	N	P	L	.	.	.	.	A	L	E	A	F	V	.	A	G	A	K	G	W	C	S
Template Known Secondary structure												S	T	T								S	S												T	T	T		S							T	T	.	.	.	.							.		T		S
Template Predicted Secondary structure																																																.	.	.	.							.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.		220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions