Job Description P39305 Confidence 70.41% Date Thu Jan 5 11:59:09 GMT 2012 Rank 194 Aligned Residues 200 % Identity 11% Template c3n6rK_ PDB info PDB header:ligase Chain: K: PDB Molecule:propionyl-coa carboxylase, alpha subunit; PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc) Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	C	W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	R	R	F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	I	D	K	V	M	A	A	I	R	A	T	G	A	Q	A	V	H	.	.	.	.	.	.	.	.	.	.	.	P	G	Y	G	F	L	S	E	N	S	K	F	A	E	A	L	E	A	E	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	I	F	V	G	P	P	K	G	A	I	E	A	M	G	D	K
Template Known Secondary structure		S												T			S			B	.	.	.	.	.	.	.	.	.	.	.			S	S	S	S	T	T										T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S								T	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140												.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.														.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	V	T	L	A	M	E	I	M	D	Y	P	L	M	S	S	I	S	K	A	L	G	Y	A	H	Y	L	N	N	P
Query Conservation
Alig confidence				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	.	S	K	K	I	A	Q	E	A	N	V	S	T	V	P	G	Y	M	G	L	I	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	E	A	V	K	I	S	N	Q	I	G	Y	P	V	M	I	K	A	S	A	M	R	I	A	W	N	D	Q	E	A	R	E	G	F	Q	S	S	K	N	D
Template Known Secondary structure				.							T	T	T													S	.	.	.	.	.	.	.	.	.	.	.	.	.	.													S	S											B		S												T
Template Predicted Secondary structure				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.															.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.											.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		W	F	Q	L	Y	P	D	I	G	N	L	S	A	W	D	N	D	V	Q	M	E	L	Q	A	G	I	G	H	I	V	A	V	H	V	K	D	T	K	P	G	V	F	K	N	V	P	F	G	E	G	V	V	D	.	.	.	.	.	.	.	.	.	.	F	E	R	C	F	E	T	L	K	Q	S	G	Y	C	G	P	Y
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.																																									.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.
Template Sequence		R	I	F	I	E	K	F	V	T	Q	.	.	.	P	R	H	I	E	I	Q	V	L	C	D	S	H	G	N	G	I	Y	L	G	E	R	E	C	S	I	Q	R	R	N	Q	K	V	V	E	E	A	P	S	P	F	L	D	E	A	T	R	R	A	M	G	E	Q	A	V	A	L	A	K	A	V	G	Y	A	S	A	G
Template Known Secondary structure										S	S	.	.	.												T	T	S															T	T								S		S	S																			T	T	T			S
Template Predicted Secondary structure												.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.				.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	E	M	W	S	E	T	A	E	D	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	E	F	I	V	D	G	Q	K	N	F
Template Known Secondary structure									T	T	S
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions