Job Description P39305 Confidence 38.40% Date Thu Jan 5 11:59:09 GMT 2012 Rank 328 Aligned Residues 145 % Identity 17% Template c3l2iB_ PDB info PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: 1.85 angstrom crystal structure of the 3-dehydroquinate dehydratase2 (arod) from salmonella typhimurium lt2. Resolution 1.85 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		K	Q	I	P	L	G	I	Y	E	K	A	L	P	A	G	E	C	W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	.	.	G	V	R	V	P	S	M	C	L	S	A	H	R	R
Query Conservation																																																																		.	.
Alig confidence																																													.	.	.	.	.																	.	.						.
Template Conservation																																													.	.	.	.	.																								.
Template Sequence		E	G	A	P	K	I	I	V	S	L	M	G	K	T	I	T	D	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	R	V	D	H	F	A	N	V	.	.	.	.	.	T	T	A	E	S	V	L	E	A	A	G	A	I	R	E	I	I	T	D	K	P	L	L	.	F	T	F	R	S	A	K	E
Template Known Secondary structure		S	S	S										S	S												T	T	S			S						G	G	G		T	T	T	.	.	.	.	.	T																		S	S				.						G	G	G
Template Predicted Secondary structure																																													.	.	.	.	.																								.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	.	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	V	T	L	A	M	E	I	M	D	Y	P
Query Conservation																															.
Alig confidence													.	.	.	.	.	.	.												.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	E	Q	A	L	T	T	G	Q	Y	.	.	.	.	.	.	.	I	D	L	N	R	A	A	V	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	V	K	A	T	V	G	Y	A	H	Q	H	N	V	A	V	I	M	S	N	H	D	F	H
Template Known Secondary structure		T		S	S								.	.	.	.	.	.	.											S			S						G	G	G			.	.	.	.	.	.	.	.	.	.	.	.	.													T	T										S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.								.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.														.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	S	S	I	S	K	A	L	G	Y	A	H	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	P	A	A	E	E	I	V	Q	R	L	R	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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